RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PGLSO95336 258 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ADH1CP00326 375 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ESR1P03372 595 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 RB1P06400 928 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PIRTP0C851 137 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 SPATA31D3P0C874 917 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 THRAP10827 490 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 CYP2A6P11509 494 aaPredicted RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 GLDCP23378 1020 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 MPSTP25325 297 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 GABRB3P28472 473 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 MZF1P28698 734 aaPredicted RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 BMPR1AP36894 532 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 SPAM1P38567 509 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 SUOXP51687 545 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ARSDP51689 593 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PLK1P53350 603 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ADARP55265 1226 aaKnown RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 POLR2LP62875 67 aaKnown RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 KDSRQ06136 332 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 TRAF2Q12933 501 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 CDC16Q13042 620 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ZNF460Q14592 562 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 HERC3Q15034 1050 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 CRY1Q16526 586 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PLEKHG6Q3KR16 790 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ARL13AQ5H913 290 aaPredicted RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 PTRHD1Q6GMV3 140 aaKnown RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 EPGNQ6UW88 154 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 LINGO4Q6UY18 593 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 TPGS1Q6ZTW0 290 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 SPATA31D4Q6ZUB0 917 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 FRMD7Q6ZUT3 714 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 GAREM2Q75VX8 874 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 TMCO2Q7Z6W1 182 aaPredicted RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 TMEM150AQ86TG1 271 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 SCUBE1Q8IWY4 988 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 BBS7Q8IWZ6 715 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 CMTM8Q8IZV2 173 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 RBFAQ8N0V3 343 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 AHI1Q8N157 1196 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 MYO1HQ8N1T3 1032 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 FBXO39Q8N4B4 442 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 KIAA1958Q8N8K9 716 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PPFIBP2Q8ND30 876 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 OR2AP1Q8NGE2 309 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 OR6Y1Q8NGX8 325 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 CEP70Q8NHQ1 597 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 AGR3Q8TD06 166 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 SH3RF2Q8TEC5 729 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 WFIKKN2Q8TEU8 576 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 POF1BQ8WVV4 589 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 JADE3Q92613 823 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 EXT2Q93063 718 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ISG20Q96AZ6 181 aaKnown RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 ULK4Q96C45 1275 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 SLC7A6OSQ96CW6 309 aaPredicted RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 L3HYPDHQ96EM0 354 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PTCD3Q96EY7 689 aaKnown RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 FAM161BQ96MY7 647 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PANX3Q96QZ0 392 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 OLFM1Q99784 485 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 LBHD1Q9BQE6 289 aaPredicted RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 EBF4Q9BQW3 602 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 TACO1Q9BSH4 297 aaKnown RBP6.89□□□□□ -1.31
USP39-219ENST00000496047 SLC2A11Q9BYW1 496 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 TM6SF2Q9BZW4 377 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 DERL2Q9GZP9 239 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ALG9Q9H6U8 611 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 TLE6Q9H808 572 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 DCLRE1BQ9H816 532 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PIDD1Q9HB75 910 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ZFYVE1Q9HBF4 777 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ATP13A2Q9NQ11 1180 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 MAN1C1Q9NR34 630 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 IGSF5Q9NSI5 407 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ZDHHC7Q9NXF8 308 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ARMCX1Q9P291 453 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 STOML1Q9UBI4 398 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 CRLS1Q9UJA2 301 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 ANGPTL2Q9UKU9 493 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PCDHGC4Q9Y5F7 938 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 WASF2Q9Y6W5 498 aa6.89□□□□□ -1.31
USP39-219ENST00000496047 PCM1Q15154 2024 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 TMEM265A0A087WTH1 108 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 A0A0J9YYE9 177 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 C1orf232A0A0U1RR37 186 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 LCHNA4D1U4 455 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 C2orf71A6NGG8 1288 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 OR51F1A6NGY5 319 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 CAPN14A8MX76 684 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 PRR5-ARHGAP8B1AHC4 643 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 TARM1B6A8C7 271 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 E9PBE3 544 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 STX16-NPEPL1H3BU86 382 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 MATN2O00339 956 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 QSOX1O00391 747 aa6.88□□□□□ -1.31
USP39-219ENST00000496047 NEMP1O14524 444 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms