RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 LYSMD1Q96S90 227 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 CDH19Q9H159 772 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 CHRDQ9H2X0 955 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 EPHX3Q9H6B9 360 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 CAB39LQ9H9S4 337 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 KCNK4Q9NYG8 393 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 IL17CQ9P0M4 197 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 INTS6Q9UL03 887 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 TMCO1Q9UM00 188 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 APOBEC2Q9Y235 224 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 RIF1Q5UIP0 2472 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 UBA6A0AVT1 1052 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 CAPN8A6NHC0 703 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 E5RI56 91 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 K7ERQ8 282 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SMAD6O43541 496 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SMIM24O75264 130 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 RHOBTB1O94844 696 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ESR1P03372 595 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 DLDP09622 509 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SLC35E2BP0CK96 405 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ATP5F1P24539 256 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SLC8A1P32418 973 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 OPRD1P41143 372 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 CSRP3P50461 194 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ARSDP51689 593 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 CCNHP51946 323 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 TAS2R39P59534 338 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ABCE1P61221 599 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ATP6V0D1P61421 351 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 IRX4P78413 519 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ZBTB16Q05516 673 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 BST1Q10588 318 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ITGA9Q13797 1035 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ARHGEF7Q14155 803 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 UBXN2BQ14CS0 331 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 PCLAFQ15004 111 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 LACTB2Q53H82 288 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 CFAP157Q5JU67 520 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 FOXR1Q6PIV2 292 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ZYG11AQ6WRX3 759 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SNX20Q7Z614 316 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 RAB44Q7Z6P3 723 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 RAVER1Q8IY67 606 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ZNF687Q8N1G0 1237 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 TTC30BQ8N4P2 665 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 TERB1Q8NA31 727 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 PIWIL2Q8TC59 973 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ULK4Q96C45 1275 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SCRN2Q96FV2 425 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 AARSD1Q9BTE6 412 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 FAM126AQ9BYI3 521 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 CIPCQ9C0C6 399 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 TNKS2Q9H2K2 1166 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 C12orf65Q9H3J6 166 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 ZDHHC6Q9H6R6 413 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 EML4Q9HC35 981 aaKnown RBP10.21□□□□□ -0.77
HDAC3-214ENST00000495485 NPHS2Q9NP85 383 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SLCO1B3Q9NPD5 702 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 PKD2L2Q9NZM6 624 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 NCKIPSDQ9NZQ3 722 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 CLEC4EQ9ULY5 219 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 KCTD3Q9Y597 815 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 SPO11Q9Y5K1 396 aa10.21□□□□□ -0.77
HDAC3-214ENST00000495485 COL4A3Q01955 1670 aa10.21□□□□□ -0.78
HDAC3-214ENST00000495485 KMT2EQ8IZD2 1858 aa10.21□□□□□ -0.78
HDAC3-214ENST00000495485 OTOL1A6NHN0 477 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SYCE1LA8MT33 242 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 PHGDHO43175 533 aaKnown RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 BUD23O43709 281 aaKnown RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 BNIP3LO60238 219 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CCDC22O60826 627 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SNNO75324 88 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 TULP3O75386 442 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 GJB3O75712 270 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 KAT7O95251 611 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 PIGNO95427 931 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 HSPA4LO95757 839 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SLC4A1P02730 911 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 PRNPP04156 253 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 PRKCGP05129 697 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CCDC166P0CW27 439 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 TPBGLP0DKB5 382 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CHRNB1P11230 501 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 PKMP14618 531 aaKnown RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 FDXRP22570 491 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 TARSP26639 723 aaKnown RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SPAM1P38567 509 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 GALK1P51570 392 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CCR3P51677 355 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SUOXP51687 545 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 DNAJB13P59910 316 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 OCRLQ01968 901 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CKAP5Q14008 2032 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CSHL1Q14406 222 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 PON2Q15165 354 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 TBCCQ15814 346 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CRY1Q16526 586 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 GAB4Q2WGN9 574 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms