RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RPL26L1Q9UNX3 145 aaKnown RBP10.54□□□□□ -0.72
NELFE-213ENST00000494956 ZNF711Q9Y462 761 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 ITPR1Q14643 2758 aa10.54□□□□□ -0.72
NELFE-213ENST00000494956 FAM208BQ5VWN6 2430 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 CCDC187A0A096LP49 1063 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 GPR39O43194 453 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 BUD23O43709 281 aaKnown RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 MTX2O75431 263 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 TNFSF15O95150 251 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 ITIH1P19827 911 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 CA5AP35218 305 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 INHBCP55103 352 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 NAP1L1P55209 391 aaKnown RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 OLIG2Q13516 323 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 TFDP2Q14188 446 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 SOWAHCQ53LP3 525 aaPredicted RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 KDELC1Q6UW63 502 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 LRRC69Q6ZNQ3 347 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 MICALCLQ6ZW33 695 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 CHST15Q7LFX5 561 aaPredicted RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 PID1Q7Z2X4 250 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 TMC3Q7Z5M5 1100 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 C17orf82Q86X59 251 aaPredicted RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 TMEM139Q8IV31 216 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 RCOR2Q8IZ40 523 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 KIAA1524Q8TCG1 905 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 CCHCR1Q8TD31 782 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 ALG3Q92685 438 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 P3H4Q92791 437 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 OXNAD1Q96HP4 312 aaPredicted RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 SLC46A1Q96NT5 459 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 GORASP1Q9BQQ3 440 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 NUDT22Q9BRQ3 303 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 DESI2Q9BSY9 194 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 SPATA16Q9BXB7 569 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 ADGRE3Q9BY15 652 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 GPR63Q9BZJ6 419 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 SEMA6CQ9H3T2 930 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 ZFYVE1Q9HBF4 777 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 HAUS2Q9NVX0 235 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 TRNAU1APQ9NX07 287 aaKnown RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 PKD2L2Q9NZM6 624 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 ATXN10Q9UBB4 475 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 APPL1Q9UKG1 709 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 PACSIN2Q9UNF0 486 aaPredicted RBP10.53□□□□□ -0.72
NELFE-213ENST00000494956 KCNK6Q9Y257 313 aa10.53□□□□□ -0.72
NELFE-213ENST00000494956 GRID2IPA4D2P6 1211 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 RHPN2P1A8MT19 583 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 CDRT15L2A8MXV6 281 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 H7C0C1 242 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 RRP8O43159 456 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 NUDT21O43809 227 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 DXOO77932 396 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 NDST3O95803 873 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 ACP5P13686 325 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 ZNF8P17098 575 aaPredicted RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 BPIP17213 487 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 MPSTP25325 297 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 RBL1P28749 1068 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 RBMS1P29558 406 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A5P35504 534 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 ETV5P41161 510 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 ATP5OP48047 213 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 NR2C2P49116 596 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 WNT3AP56704 352 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 PCBP4P57723 403 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 CXADRP78310 365 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 CFHR1Q03591 330 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 TLE3Q04726 772 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 SRSF6Q13247 344 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 PTPRCAPQ14761 206 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 PLA2G4EQ3MJ16 856 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 KHDC1Q4VXA5 237 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 CRTC3Q6UUV7 619 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 ZNF574Q6ZN55 896 aaPredicted RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 RAB11FIP2Q7L804 512 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 NLRP8Q86W28 1048 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 GALNT13Q8IUC8 556 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 TMTC1Q8IUR5 882 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 FBXO39Q8N4B4 442 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 RCBTB1Q8NDN9 531 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 WDR36Q8NI36 951 aaKnown RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 MRGPRX2Q96LB1 330 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 ZNF578Q96N58 590 aaPredicted RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 QKIQ96PU8 341 aaKnown RBP eCLIP10.52□□□□□ -0.73
NELFE-213ENST00000494956 CDH19Q9H159 772 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 OR2AG1Q9H205 316 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 CPNE5Q9HCH3 593 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 WDR70Q9NW82 654 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 TMEM9Q9P0T7 183 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 KLHL8Q9P2G9 620 aaPredicted RBP10.52□□□□□ -0.73
NELFE-213ENST00000494956 PISDQ9UG56 409 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 FAM153AQ9UHL3 310 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 TMPRSS11EQ9UL52 423 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 DNPEPQ9ULA0 475 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 CACNA1GO43497 2377 aa10.52□□□□□ -0.73
NELFE-213ENST00000494956 PTPRQQ9UMZ3 2332 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 MACROD2A1Z1Q3 448 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 PLD2O14939 933 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 KLK10O43240 276 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms