RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PEX6Q13608 980 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 COLEC12Q5KU26 742 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 ZNF648Q5T619 568 aaPredicted RBP12.54□□□□□ -0.4
SKA1-205ENST00000494518 DCAF12Q5T6F0 453 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 HGSNATQ68CP4 663 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 NCBP2-AS2Q69YL0 99 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 TMEM71Q6P5X7 295 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 BORAQ6PGQ7 559 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 XKR5Q6UX68 686 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 NDUFAF2Q8N183 169 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 OR10G6Q8NH81 332 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 NCSTNQ92542 709 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 COX14Q96I36 57 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 DDA1Q9BW61 102 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
SKA1-205ENST00000494518 SLC25A18Q9H1K4 315 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 APMAPQ9HDC9 416 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 GEMIN8Q9NWZ8 242 aaKnown RBP12.54□□□□□ -0.4
SKA1-205ENST00000494518 TBC1D29Q9UFV1 150 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 IP6K2Q9UHH9 426 aa12.54□□□□□ -0.4
SKA1-205ENST00000494518 RP1L1Q8IWN7 2480 aaPredicted RBP12.54□□□□□ -0.4
SKA1-205ENST00000494518 C1orf232A0A0U1RR37 186 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 SMTNL1A8MU46 457 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 FADS2P1A8MWK0 482 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 NKX2-8O15522 239 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 DNAJC6O75061 913 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 SERPINC1P01008 464 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 SLC4A1P02730 911 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 FASLGP48023 281 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 ZNF165P49910 485 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 POLE2P56282 527 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 GPLD1P80108 840 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 HHEXQ03014 270 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 TLE1Q04724 770 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 GALNT2Q10471 571 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 KCNAB2Q13303 367 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 DPYSL3Q14195 570 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 NFKBIBQ15653 356 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 SKIDA1Q1XH10 827 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.53□□□□□ -0.4
SKA1-205ENST00000494518 ZNF765Q7L2R6 523 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 SFRP1Q8N474 314 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 NIPA2Q8N8Q9 360 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 BMPERQ8N8U9 685 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 EXD1Q8NHP7 514 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 CPLX3Q8WVH0 158 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 MAML1Q92585 1016 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 RTP4Q96DX8 246 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 WDR24Q96S15 920 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 TBC1D10AQ9BXI6 508 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 B3GNT4Q9C0J1 378 aa12.53□□□□□ -0.4
SKA1-205ENST00000494518 CNOT6Q9ULM6 557 aaKnown RBP12.53□□□□□ -0.4
SKA1-205ENST00000494518 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.4
SKA1-205ENST00000494518 A0A087X0T9 212 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 LOC101059948A0A1B0GTJ6 334 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 B4E171 279 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 MATN3O15232 486 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 MBD3O95983 291 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 PRLP01236 227 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 FAM228BP0C875 321 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 SFTPCP11686 197 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ZNF30P17039 623 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 TSPAN7P41732 249 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ARSEP51690 589 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 TAS2R40P59535 323 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 GBE1Q04446 702 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 LRP8Q14114 963 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 GALNT3Q14435 633 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 PAFAH1B3Q15102 231 aaKnown RBP12.52□□□□□ -0.41
SKA1-205ENST00000494518 PLA2G4EQ3MJ16 856 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ATP1A1-AS1Q5TC04 95 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ALS2CLQ60I27 953 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 TIPARPQ7Z3E1 657 aaKnown RBP12.52□□□□□ -0.41
SKA1-205ENST00000494518 SPNS2Q8IVW8 549 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ARRDC2Q8TBH0 407 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 BPIFA3Q9BQP9 254 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ASPSCR1Q9BZE9 553 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 BRD8Q9H0E9 1235 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 GPN2Q9H9Y4 310 aaPredicted RBP12.52□□□□□ -0.41
SKA1-205ENST00000494518 PCDH9Q9HC56 1237 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ZNF71Q9NQZ8 489 aaPredicted RBP12.52□□□□□ -0.41
SKA1-205ENST00000494518 PILRAQ9UKJ1 303 aa12.52□□□□□ -0.41
SKA1-205ENST00000494518 ZNF891A8MT65 544 aaPredicted RBP12.51□□□□□ -0.41
SKA1-205ENST00000494518 MYO1FO00160 1098 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 CYP1A2P05177 515 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 PYGLP06737 847 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 PIRTP0C851 137 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 CD86P42081 329 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 CCR10P46092 362 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 RAB15P59190 212 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 SQSTM1Q13501 440 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 NR1I3Q14994 352 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
SKA1-205ENST00000494518 QPCTQ16769 361 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 HADHQ16836 314 aaKnown RBP12.51□□□□□ -0.41
SKA1-205ENST00000494518 ANKRD20A8PQ5CZ79 823 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 ZFYVE27Q5T4F4 411 aa12.51□□□□□ -0.41
SKA1-205ENST00000494518 ALG1LQ6GMV1 187 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms