RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SAP25Q8TEE9 199 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 LRIG1Q96JA1 1093 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 FEM1CQ96JP0 617 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.18□□□□□ -1.1
RIF1-211ENST00000494333 TTYH3Q9C0H2 523 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 KLC2Q9H0B6 622 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 DHX35Q9H5Z1 703 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 ERVMER34-1Q9H9K5 563 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 FZD3Q9NPG1 666 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 GPATCH2LQ9NWQ4 482 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 MYO1AQ9UBC5 1043 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 CNOT8Q9UFF9 292 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 NDOR1Q9UHB4 597 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 PCSK1NQ9UHG2 260 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 ZFR2Q9UPR6 939 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 COA3Q9Y2R0 106 aaPredicted RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 FADS3Q9Y5Q0 445 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 LAMA1P25391 3075 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 CACNA1EQ15878 2313 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 TPRP12270 2363 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 ZSCAN5CA6NGD5 496 aaPredicted RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 C16orf96A6NNT2 1141 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 NEMP1O14524 444 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 PPP1R12AO14974 1030 aaPredicted RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 YKT6O15498 198 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 DAPK3O43293 454 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 TMCC1O94876 653 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 LDOC1O95751 146 aaPredicted RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 GSRP00390 522 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 UGT2B4P06133 528 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 THEGLP0DJG4 465 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 HNRNPA2B1P22626 353 aaKnown RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 AKT2P31751 481 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 RXRGP48443 463 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 CLDN2P57739 230 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 RHOAP61586 193 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 RPS21P63220 83 aaKnown RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 GUCY1A3Q02108 690 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 RAD51Q06609 339 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 CA9Q16790 459 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 INAVAQ3KP66 663 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 PARP15Q460N3 678 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 INO80DQ53TQ3 878 aaPredicted RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 TDRD12Q587J7 1177 aaKnown RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 ZNF805Q5CZA5 627 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 ZNF648Q5T619 568 aaPredicted RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 ATXN7L2Q5T6C5 722 aaPredicted RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 PARS2Q7L3T8 475 aaKnown RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 TTC7BQ86TV6 843 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 UMODL1-AS1Q8N2C9 162 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 EID2Q8N6I1 236 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 POU5F2Q8N7G0 328 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 ZNF653Q96CK0 615 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 HMCESQ96FZ2 354 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 PEX11GQ96HA9 241 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 KLHL32Q96NJ5 620 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 JAM3Q9BX67 310 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 SLC17A9Q9BYT1 436 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 TRIM7Q9C029 511 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 MRPL47Q9HD33 250 aaKnown RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 DONSONQ9NYP3 566 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 FTSJ1Q9UET6 329 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 PCDHA9Q9Y5H5 950 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 BZW2Q9Y6E2 419 aaKnown RBP8.17□□□□□ -1.1
RIF1-211ENST00000494333 KNL1Q8NG31 2342 aa8.17□□□□□ -1.1
RIF1-211ENST00000494333 TEX51A0A1B0GUA7 166 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 IGLON5A6NGN9 336 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 J3KR12 359 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 EEF2KO00418 725 aaKnown RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 PLD2O14939 933 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 TSPAN6O43657 245 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 AP1G1O43747 822 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 PRPSAP2O60256 369 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 SDC3O75056 442 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 MYBL1P10243 752 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 GRK2P25098 689 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 EPHA8P29322 1005 aaPredicted RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 MIPP30301 263 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 HTR7P34969 479 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 GRK3P35626 688 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 PBX1P40424 430 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 PAPOLAP51003 745 aaKnown RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 NDST2P52849 883 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 DNAJC3Q13217 504 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 SGCGQ13326 291 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 CYTH1Q15438 398 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 PPP6R3Q5H9R7 873 aaPredicted RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 KIAA1161Q6NSJ0 714 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 GDPD4Q6W3E5 623 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 CCNI2Q6ZMN8 369 aaPredicted RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 Q6ZSR6 202 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 RFX8Q6ZV50 586 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 SYDE1Q6ZW31 735 aaPredicted RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 MTDHQ86UE4 582 aaKnown RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 DCP2Q8IU60 420 aaKnown RBP8.16□□□□□ -1.1
RIF1-211ENST00000494333 FNIP1Q8TF40 1166 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 CASKIN2Q8WXE0 1202 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 RAB7BQ96AH8 199 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 VOPP1Q96AW1 172 aa8.16□□□□□ -1.1
RIF1-211ENST00000494333 CELF6Q96J87 481 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms