RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 LLGL1Q15334 1064 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 MFSD7Q6UXD7 560 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 USP53Q70EK8 1073 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 MARK2Q7KZI7 788 aaKnown RBP13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 ZNF438Q7Z4V0 828 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 SLITRK4Q8IW52 837 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 ZSCAN1Q8NBB4 408 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 RIOK2Q9BVS4 552 aaKnown RBP13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 SEMA6CQ9H3T2 930 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 FAM83DQ9H4H8 585 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 RMI1Q9H9A7 625 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 RDH14Q9HBH5 336 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 KCNK4Q9NYG8 393 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 ACSL6Q9UKU0 697 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 PRKAB1Q9Y478 270 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 HEY1Q9Y5J3 304 aa13.3□□□□□ -0.28
CTDSP1-212ENST00000494067 ZNF487B1APH4 448 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 ANKRD66B4E2M5 251 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 APOL1O14791 398 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 HGSO14964 777 aaPredicted RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 PPM1DO15297 605 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 DNAJC6O75061 913 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 KRT1P04264 644 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 ATP1A1P05023 1023 aaKnown RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 PIRTP0C851 137 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 SLC1A1P43005 524 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 TNNT3P45378 269 aaPredicted RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 MARCKSL1P49006 195 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 TRA2AQ13595 282 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 NR1D2Q14995 579 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 PDK1Q15118 436 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 PYCR3Q53H96 274 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 MANEAQ5SRI9 462 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 ZNF574Q6ZN55 896 aaPredicted RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 BZW1Q7L1Q6 419 aaKnown RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 VSIG1Q86XK7 387 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 TC2NQ8N9U0 490 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 OR10G6Q8NH81 332 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 USP7Q93009 1102 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 SH3KBP1Q96B97 665 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 TADA1Q96BN2 335 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 LYSMD1Q96S90 227 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 SRPK1Q96SB4 655 aaKnown RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 SLC38A3Q99624 504 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 NUDT22Q9BRQ3 303 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 B3GNT4Q9C0J1 378 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 RAD18Q9NS91 495 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 DDX56Q9NY93 547 aaKnown RBP13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 VPS18Q9P253 973 aa13.29□□□□□ -0.28
CTDSP1-212ENST00000494067 EFSO43281 561 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 TNNT1P13805 278 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 PECAM1P16284 738 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 COMTP21964 271 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 CSF2RBP32927 897 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 CSTF2P33240 577 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 SPINT3P49223 89 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 DYNLT1P63172 113 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 GPLD1P80108 840 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 C16orf72Q14CZ0 275 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 TCEAL1Q15170 157 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 TAZQ16635 292 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 ZNF648Q5T619 568 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 HENMT1Q5T8I9 393 aaKnown RBP13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 CHST15Q7LFX5 561 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 LYSMD3Q7Z3D4 306 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 KDELC2Q7Z4H8 507 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 NT5DC3Q86UY8 548 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 ZNF761Q86XN6 746 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 RFX6Q8HWS3 928 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 AVL9Q8NBF6 648 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 OR4D9Q8NGE8 314 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 SPATA22Q8NHS9 363 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 PMEPA1Q969W9 287 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 ARHGAP9Q9BRR9 750 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 ZFYVE1Q9HBF4 777 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 ARFGAP3Q9NP61 516 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 TMEM9Q9P0T7 183 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 UNC13CQ8NB66 2214 aa13.28□□□□□ -0.28
CTDSP1-212ENST00000494067 PRAMEF33A0A0G2JMD5 474 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 DUX1O43812 170 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 PRAMEF10O60809 474 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 MT-CYBP00156 380 aaPredicted RBP13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 CD1CP29017 333 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 CD68P34810 354 aaPredicted RBP13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 CDKN2BP42772 138 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 ATP1A2P50993 1020 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 ARSDP51689 593 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 LIMK2P53671 638 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 SQSTM1Q13501 440 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 NOMO1Q15155 1222 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 TGIF1Q15583 401 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 LRRC38Q5VT99 294 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 NKAIN2Q5VXU1 208 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 KIAA1614Q5VZ46 1190 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 XKR5Q6UX68 686 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 SLC9B2Q86UD5 537 aa13.27□□□□□ -0.29
CTDSP1-212ENST00000494067 CNGA4Q8IV77 575 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms