RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CALB1P05937 261 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 DDX6P26196 483 aaKnown RBP eCLIP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 VIPR2P41587 438 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 NPY2RP49146 381 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ZNF829Q3KNS6 432 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 SPATS1Q496A3 300 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 EFHC1Q5JVL4 640 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 C1orf146Q5VVC0 180 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 PMF1Q6P1K2 205 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 STRA8Q7Z7C7 330 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ARID3BQ8IVW6 561 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 CMTM8Q8IZV2 173 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 IQCKQ8N0W5 287 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ARL14EPQ8N8R7 260 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 OR7D4Q8NG98 312 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 SLC20A1Q8WUM9 679 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 SLC35F5Q8WV83 523 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ZNF486Q96H40 463 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 PRICKLE1Q96MT3 831 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 SLC22A12Q96S37 553 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 NTMT1Q9BV86 223 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 SLC46A2Q9BY10 475 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ZCCHC2Q9C0B9 1178 aaKnown RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 TTYH3Q9C0H2 523 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 TLR8Q9NR97 1041 aaKnown RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 NAGPAQ9UK23 515 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 LOC390937A0A1W2PQ73 354 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 A0A1W2PQH9 124 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TOR1AO14656 332 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PCDH17O14917 1159 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ATG13O75143 517 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SOCS5O75159 536 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SNAP29O95721 258 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 RRM2P31350 389 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TALDO1P37837 337 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PBX1P40424 430 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 HTR2BP41595 481 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SNTA1Q13424 505 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 CCDC6Q16204 474 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 RAB41Q5JT25 222 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TANGO2Q6ICL3 276 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 KLHDC10Q6PID8 442 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZYG11AQ6WRX3 759 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TAS2R42Q7RTR8 314 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 MON1AQ86VX9 555 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 EPHX4Q8IUS5 362 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZNF619Q8N2I2 560 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 FAM109AQ8N4B1 249 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SH2D3CQ8N5H7 860 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 LPCAT1Q8NF37 534 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 CPLX3Q8WVH0 158 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 OVCA2Q8WZ82 227 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SLC22A18Q96BI1 424 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 MSANTD3Q96H12 275 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 C7orf26Q96N11 449 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 CYP2S1Q96SQ9 504 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 RPP25Q9BUL9 199 aaKnown RBP11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TNKS2Q9H2K2 1166 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SMOC2Q9H3U7 446 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 STN1Q9H668 368 aaKnown RBP11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZFP14Q9HCL3 533 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 IGSF9Q9P2J2 1179 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZNF212Q9UDV6 495 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PCDHGC3Q9UN70 934 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SCML2Q9UQR0 700 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 STK38LQ9Y2H1 464 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 CSNK1G3Q9Y6M4 447 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 FAM92AA1XBS5 289 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 A8MUI8 341 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 EVPLLA8MZ36 301 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 E5RJQ4 531 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TLR5O60602 858 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PTP4A3O75365 173 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TIPRLO75663 272 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PLGP00747 810 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SLC2A3P11169 496 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 HDCP19113 662 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 MX2P20592 715 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 FCARP24071 287 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 TTKP33981 857 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 GP5P40197 560 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 HNF4AP41235 474 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 MLLT3P42568 568 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PPP3CCP48454 512 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PGFP49763 221 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 KCNJ10P78508 379 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 POU6F1Q14863 301 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 MEA1Q16626 185 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 DUSP7Q16829 419 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 MINDY4Q4G0A6 757 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PXDC1Q5TGL8 231 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 AGBL2Q5U5Z8 902 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 PM20D1Q6GTS8 502 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SHQ1Q6PI26 577 aaKnown RBP11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZSWIM9Q86XI8 627 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 BBS7Q8IWZ6 715 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ACTRT2Q8TDY3 377 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 KCTD13Q8WZ19 329 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 BAP1Q92560 729 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms