RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CDK16Q00536 496 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 LAMB3Q13751 1172 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 ATP13A5Q4VNC0 1218 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 PPM1JQ5JR12 505 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 CERCAMQ5T4B2 595 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 KCTD16Q68DU8 428 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 TAF8Q7Z7C8 310 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 GKN2Q86XP6 184 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 OR13C4Q8NGS5 318 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 ZNF398Q8TD17 642 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 DTX3LQ8TDB6 740 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 SCG3Q8WXD2 468 aaKnown RBP13.86□□□□□ -0.19
CCM2-217ENST00000492883 ZNF592Q92610 1267 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 CNDP2Q96KP4 475 aaKnown RBP13.86□□□□□ -0.19
CCM2-217ENST00000492883 DUSP23Q9BVJ7 150 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 TMEM168Q9H0V1 697 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A7Q9HAW7 530 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A10Q9HAW8 530 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A8Q9HAW9 530 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 TRIM39Q9HCM9 518 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 ARFGAP3Q9NP61 516 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 FTSJ1Q9UET6 329 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 PCYOX1Q9UHG3 505 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 ZNHIT2Q9UHR6 403 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 FKBPLQ9UIM3 349 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 APPL1Q9UKG1 709 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 NEU2Q9Y3R4 380 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 OAS3Q9Y6K5 1087 aaKnown RBP13.86□□□□□ -0.19
CCM2-217ENST00000492883 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
CCM2-217ENST00000492883 TRPM6Q9BX84 2022 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
CCM2-217ENST00000492883 SPAARA0A1B0GVQ0 90 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 CCDC78A2IDD5 438 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 HEATR9A2RTY3 570 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 TRIM38O00635 465 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 YY2O15391 372 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 TNFSF14O43557 240 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 SIGLEC6O43699 453 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 FUCA1P04066 466 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 IVLP07476 585 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 TPSB2P20231 275 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 ADRA1DP25100 572 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 NPY2RP49146 381 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 ZNF140P52738 457 aaPredicted RBP13.85□□□□□ -0.19
CCM2-217ENST00000492883 SESN2P58004 480 aaPredicted RBP13.85□□□□□ -0.19
CCM2-217ENST00000492883 SIM1P81133 766 aaPredicted RBP13.85□□□□□ -0.19
CCM2-217ENST00000492883 ITGA9Q13797 1035 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 TPSAB1Q15661 275 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 SKIDA1Q1XH10 827 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 DEFB133Q30KQ1 61 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 CCDC38Q502W7 563 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 ZNF648Q5T619 568 aaPredicted RBP13.85□□□□□ -0.19
CCM2-217ENST00000492883 GALNT13Q8IUC8 556 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 PHYKPLQ8IUZ5 450 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 SDR16C5Q8N3Y7 309 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 OR4C6Q8NH72 309 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 STYXQ8WUJ0 223 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 DNAJC1Q96KC8 554 aaKnown RBP13.85□□□□□ -0.19
CCM2-217ENST00000492883 VPS35Q96QK1 796 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 C19orf43Q9BQ61 176 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 CLPBQ9H078 707 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 ASB8Q9H765 288 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 NLE1Q9NVX2 485 aaPredicted RBP13.85□□□□□ -0.19
CCM2-217ENST00000492883 NLGN3Q9NZ94 848 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 BFARQ9NZS9 450 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 VPS18Q9P253 973 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 ATXN10Q9UBB4 475 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 ASIC3Q9UHC3 531 aa13.85□□□□□ -0.19
CCM2-217ENST00000492883 TCRBV7S3A2A0A539 114 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 LMO7DNF2Z398 122 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 CCL22O00626 93 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 TPP1O14773 563 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 MTX2O75431 263 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 SRP72O76094 671 aaKnown RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 URI1O94763 535 aaPredicted RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 PRAMEF1O95521 474 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 TUBB4AP04350 444 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 CELA2BP08218 269 aaPredicted RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 GIMD1P0DJR0 217 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 PTGIRP43119 386 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 DR1Q01658 176 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 GTF2H3Q13889 308 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 KCNJ11Q14654 390 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 LRRC8BQ6P9F7 803 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 LVRNQ6Q4G3 990 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 SYDE1Q6ZW31 735 aaPredicted RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 PPHLN1Q8NEY8 458 aaKnown RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 BAHD1Q8TBE0 780 aaPredicted RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 PTCD2Q8WV60 388 aaKnown RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 CPT1BQ92523 772 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 SLCO2A1Q92959 643 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 SCARF2Q96GP6 870 aaPredicted RBP13.84□□□□□ -0.19
CCM2-217ENST00000492883 TTC25Q96NG3 672 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 OR2M4Q96R27 311 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 RANBP9Q96S59 729 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 KRT12Q99456 494 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 GSDMCQ9BYG8 508 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 RMI1Q9H9A7 625 aa13.84□□□□□ -0.19
CCM2-217ENST00000492883 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms