RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	TRIM44	Q96DX7	344 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	C19orf43	Q9BQ61	176 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	CLPB	Q9H078	707 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	RMI1	Q9H9A7	625 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	CARS2	Q9HA77	564 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	ETNK1	Q9HBU6	452 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	RAB6B	Q9NRW1	208 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	KCND1	Q9NSA2	647 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	IL17C	Q9P0M4	197 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	VPS18	Q9P253	973 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	PCDHGA1	Q9Y5H4	931 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	ZFHX4	Q86UP3	3567 aa		13.72	□□□□□ -0.21
PTPN7-215	ENST00000492451	SCN8A	Q9UQD0	1980 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	GOLGA6L10	A0A0M3HER8	536 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	FADS2P1	A8MWK0	482 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	YY2	O15391	372 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	STX7	O15400	261 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	ASMTL	O95671	621 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	GAS8	O95995	478 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	PROS1	P07225	676 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	CKMT1A	P12532	417 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	ACP1	P24666	158 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	SPAM1	P38567	509 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	RPIA	P49247	311 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	DAB2	P98082	770 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	SEMA5A	Q13591	1074 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	SPARCL1	Q14515	664 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	DEFB133	Q30KQ1	61 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	DOK6	Q6PKX4	331 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	MARCH9	Q86YJ5	346 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	PHYKPL	Q8IUZ5	450 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	TAB3	Q8N5C8	712 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	GLYATL1	Q969I3	302 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	MAGOHB	Q96A72	148 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	SCARF2	Q96GP6	870 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	MS4A14	Q96JA4	679 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	VPS35	Q96QK1	796 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	BPIFA1	Q9NP55	256 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	MRPL40	Q9NQ50	206 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	CNOT6	Q9ULM6	557 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	SUFU	Q9UMX1	484 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	NEUROG3	Q9Y4Z2	214 aa		13.71	□□□□□ -0.21
PTPN7-215	ENST00000492451	CTAGE9	A4FU28	777 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPR89A	B7ZAQ6	455 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	SUN1	O94901	812 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	DKK1	O94907	266 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	SLC25A14	O95258	325 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPR89B	P0CG08	455 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	RPL22	P35268	128 aa	Known RBP	13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	GNPDA1	P46926	289 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	KCNJ1	P48048	391 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	POLD2	P49005	469 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	ILF3	Q12906	894 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	OLIG2	Q13516	323 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	LAMB3	Q13751	1172 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	ITGA9	Q13797	1035 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	C6orf132	Q5T0Z8	1188 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	KCTD16	Q68DU8	428 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	TAF8	Q7Z7C8	310 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	TRIM74	Q86UV6	250 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPBAR1	Q8TDU6	330 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	COG1	Q8WTW3	980 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	ADAMTS14	Q8WXS8	1223 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	APOLD1	Q96LR9	279 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	NAPG	Q99747	312 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	BOC	Q9BWV1	1114 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	AP1M1	Q9BXS5	423 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	GSDMC	Q9BYG8	508 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	TMEM168	Q9H0V1	697 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	TRIM39	Q9HCM9	518 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	IL26	Q9NPH9	171 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	APPL1	Q9UKG1	709 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	TMEM98	Q9Y2Y6	226 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	ARL5A	Q9Y689	179 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZZEF1	O43149	2961 aa		13.7	□□□□□ -0.22
PTPN7-215	ENST00000492451	GLYATL1P3	A0A0U1RQE8	302 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	FAM221B	A6H8Z2	402 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	AP3B1	O00203	1094 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	VEGFD	O43915	354 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	RFPL3	O75679	317 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	FUCA1	P04066	466 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	APRT	P07741	180 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZSCAN5DP	P0CG00	497 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	ETS1	P14921	441 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	HADHA	P40939	763 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	ACADVL	P49748	655 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	CDH17	Q12864	832 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	DNAJC3	Q13217	504 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	MSLN	Q13421	630 aa	Predicted RBP	13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	LRP8	Q14114	963 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	NR0B2	Q15466	257 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	CYP1B1	Q16678	543 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	PAPD7	Q5XG87	772 aa	Known RBP	13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	PPP1R21	Q6ZMI0	780 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	NYAP1	Q6ZVC0	841 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	GALNT13	Q8IUC8	556 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	DNAAF3	Q8N9W5	541 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	GLIS1	Q8NBF1	620 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms