RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ACVR1Q04771 509 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 DEFB115Q30KQ5 88 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 CTSL3PQ5NE16 218 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 C6orf10Q5SRN2 563 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 CXorf57Q6NSI4 855 aaKnown RBP12.39□□□□□ -0.43
HMGN1-220ENST00000492280 IYDQ6PHW0 289 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 ANKS3Q6ZW76 656 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 FAM126BQ8IXS8 530 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 SPDYE1Q8NFV5 336 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-220ENST00000492280 EID2BQ96D98 161 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 CCDC126Q96EE4 140 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 POLG2Q9UHN1 485 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 AP4B1Q9Y6B7 739 aa12.39□□□□□ -0.43
HMGN1-220ENST00000492280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 FAM149AA5PLN7 773 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 TRIM38O00635 465 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 NRP2O60462 931 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CRTAMO95727 393 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 ATP6V1B2P21281 511 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 HOXD10P28358 340 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CLCQ05315 142 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 ZNF177Q13360 481 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 HERC3Q15034 1050 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 MTX3Q5HYI7 312 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 OR52B6Q8NGF0 335 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 L3HYPDHQ96EM0 354 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 SPATA17Q96L03 361 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 BIRC8Q96P09 236 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 GBP5Q96PP8 586 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CLSTN3Q9BQT9 956 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 SNX13Q9Y5W8 968 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 NRG2O14511 850 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CASQ2O14958 399 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 TBL1XO60907 577 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CRCPO75575 148 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 TIPRLO75663 272 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 BAIAP3O94812 1187 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 MT-ND1P03886 318 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 GJA1P17302 382 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CR2P20023 1033 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 RPL10P27635 214 aaKnown RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 GRIA3P42263 894 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 PIK3CGP48736 1102 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 ALDH7A1P49419 539 aaKnown RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 HK2P52789 917 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CDH4P55283 916 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CREB5Q02930 508 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 TXNDC8Q6A555 127 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 SATL1Q86VE3 508 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CAMK1DQ8IU85 385 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 AFAP1L2Q8N4X5 818 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 GABPB2Q8TAK5 448 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 LINGO1Q96FE5 620 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 BOCQ9BWV1 1114 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 MAGEH1Q9H213 219 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-220ENST00000492280 SLAMF8Q9P0V8 285 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 VPS28Q9UK41 221 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 CLEC4EQ9ULY5 219 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 ASB3Q9Y575 518 aa12.38□□□□□ -0.43
HMGN1-220ENST00000492280 H0Y626 953 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 SMAD6O43541 496 aaKnown RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 HSPA1AP0DMV8 641 aaKnown RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 HSPA1BP0DMV9 641 aaKnown RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 MBL2P11226 248 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 CKMT2P17540 419 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 GPX3P22352 226 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 PAX3P23760 479 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 INHBCP55103 352 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 STX1BP61266 288 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 SATB1Q01826 763 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 RBBP7Q16576 425 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 GSTA3Q16772 222 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 LRRC73Q5JTD7 316 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 RARS2Q5T160 578 aaKnown RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 FAM151BQ6UXP7 276 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 SYVN1Q86TM6 617 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 CLYBLQ8N0X4 340 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 CLDN19Q8N6F1 224 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 SLCO4A1Q96BD0 722 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 PLEKHG4BQ96PX9 1271 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 NR1H4Q96RI1 486 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 CIB1Q99828 191 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 TAS2R13Q9NYV9 303 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 PRSS51A0A1B0GVH4 220 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 NME4O00746 187 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 KDELR3O43731 214 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 SMAD3P84022 425 aaKnown RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 TRIM25Q14258 630 aaKnown RBP12.37□□□□□ -0.43
HMGN1-220ENST00000492280 TYSND1Q2T9J0 566 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 FUT11Q495W5 492 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 EP400NLQ6ZTU2 488 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 LYSMD3Q7Z3D4 306 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 PHYKPLQ8IUZ5 450 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 BBS5Q8N3I7 341 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 CDYL2Q8N8U2 506 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms