RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SLC46A1Q96NT5 459 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 LYSMD1Q96S90 227 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 FERMT1Q9BQL6 677 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 RIOK2Q9BVS4 552 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 FOXP3Q9BZS1 431 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 PRORYQ9H606 182 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 PCDH9Q9HC56 1237 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 SAE1Q9UBE0 346 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 APPL1Q9UKG1 709 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 CNOT6Q9ULM6 557 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 TMEM98Q9Y2Y6 226 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 UNC13CQ8NB66 2214 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 BAHCC1Q9P281 2608 aa12.63□□□□□ -0.39
SEC61A1-206ENST00000491668 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 D6RAR5 112 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 H7C0C1 242 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 PDE2AO00408 941 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 RPLP0P05388 317 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 IVLP07476 585 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 PECAM1P16284 738 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ZNF30P17039 623 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 NFKBIAP25963 317 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ADCY8P40145 1251 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ABCG1P45844 678 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 GPR1P46091 355 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ATP5OP48047 213 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 CTBSQ01459 385 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 AP1B1Q10567 949 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 SPIDRQ14159 915 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 C14orf28Q4W4Y0 310 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ZNF765Q7L2R6 523 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ZC3H18Q86VM9 953 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 NLRP8Q86W28 1048 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 SPACA3Q8IXA5 215 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 Q8N9G6 341 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 PATE1Q8WXA2 126 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 GRAMD1AQ96CP6 724 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 IMP4Q96G21 291 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 COX14Q96I36 57 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ZNF578Q96N58 590 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 DPEP2Q9H4A9 486 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 TRNAU1APQ9NX07 287 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 KCTD5Q9NXV2 234 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 TAAR2Q9P1P5 351 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 MOSPD1Q9UJG1 213 aa12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 ATXN7L1Q9ULK2 861 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 OAS3Q9Y6K5 1087 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-206ENST00000491668 FADS2P1A8MWK0 482 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 ANKRD66B4E2M5 251 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 PGRMC1O00264 195 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 CES2O00748 559 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 B4GAT1O43505 415 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 GLB1P16278 677 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 PAFAH1B1P43034 410 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 EPHB1P54762 984 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 MAZP56270 477 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 EIF3EP60228 445 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 ERVPABLB-1P60509 514 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 B4GALNT1Q00973 533 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 GALNT3Q14435 633 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 PRKD1Q15139 912 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 DNTTIP2Q5QJE6 756 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 DOK6Q6PKX4 331 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 ZNF438Q7Z4V0 828 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 CCNJLQ8IV13 435 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 NRSN1Q8IZ57 195 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 LSMEM2Q8N112 164 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 SPATA22Q8NHS9 363 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 ACTL9Q8TC94 416 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 COG1Q8WTW3 980 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 TFB1MQ8WVM0 346 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 NAF1Q96HR8 494 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 MS4A14Q96JA4 679 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 GFM1Q96RP9 751 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 HERPUD2Q9BSE4 406 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 LRRN3Q9H3W5 708 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 SYNDIG1Q9H7V2 258 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 HAUS2Q9NVX0 235 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 SEPT10Q9P0V9 454 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 LRIT1Q9P2V4 623 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 PCDHGA8Q9Y5G5 932 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 AHCTF1Q8WYP5 2266 aa12.61□□□□□ -0.39
SEC61A1-206ENST00000491668 PIEZO2Q9H5I5 2752 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 SCN8AQ9UQD0 1980 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms