RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 KDELC2Q7Z4H8 507 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 VASH2Q86V25 355 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 ZNF761Q86XN6 746 aaPredicted RBP18.24■□□□□ 0.51
SMIM4-205ENST00000491607 RAVER1Q8IY67 606 aaKnown RBP18.24■□□□□ 0.51
SMIM4-205ENST00000491607 PLD5Q8N7P1 536 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 CNTD1Q8N815 330 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 SLC37A2Q8TED4 501 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 AHCYL2Q96HN2 611 aaKnown RBP18.24■□□□□ 0.51
SMIM4-205ENST00000491607 CCDC42Q96M95 316 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 SLC38A3Q99624 504 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 ABHD10Q9NUJ1 306 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 VPS18Q9P253 973 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 PCYT1BQ9Y5K3 369 aaPredicted RBP18.24■□□□□ 0.51
SMIM4-205ENST00000491607 OAS3Q9Y6K5 1087 aaKnown RBP18.24■□□□□ 0.51
SMIM4-205ENST00000491607 KALRNO60229 2985 aa18.24■□□□□ 0.51
SMIM4-205ENST00000491607 FADS2P1A8MWK0 482 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 DNAJC6O75061 913 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 SLC4A1P02730 911 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 KRT1P04264 644 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 TNNT1P13805 278 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 ARHGAP25P42331 645 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 LIMK2P53671 638 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 IFI35P80217 286 aaPredicted RBP18.23■□□□□ 0.51
SMIM4-205ENST00000491607 HENMT1Q5T8I9 393 aaKnown RBP18.23■□□□□ 0.51
SMIM4-205ENST00000491607 LYSMD3Q7Z3D4 306 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 OR4D9Q8NGE8 314 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 AGAP3Q96P47 875 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 WDR24Q96S15 920 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 CHP1Q99653 195 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 NHEJ1Q9H9Q4 299 aaPredicted RBP18.23■□□□□ 0.51
SMIM4-205ENST00000491607 TMEM9Q9P0T7 183 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 CNOT6Q9ULM6 557 aaKnown RBP18.23■□□□□ 0.51
SMIM4-205ENST00000491607 ATMQ13315 3056 aa18.23■□□□□ 0.51
SMIM4-205ENST00000491607 GCN1Q92616 2671 aaKnown RBP18.23■□□□□ 0.51
SMIM4-205ENST00000491607 ZIC2O95409 532 aaPredicted RBP18.22■□□□□ 0.51
SMIM4-205ENST00000491607 EML2O95834 649 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 ACP5P13686 325 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 CD82P27701 267 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 CSF2RBP32927 897 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 CSTF2P33240 577 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMIM4-205ENST00000491607 FASLGP48023 281 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 DYNLT1P63172 113 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 GPLD1P80108 840 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 TRA2AQ13595 282 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMIM4-205ENST00000491607 PDK1Q15118 436 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 PCSK7Q16549 785 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 SLC9A4Q6AI14 798 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 NPNTQ6UXI9 565 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 RFX6Q8HWS3 928 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 RHOT2Q8IXI1 618 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 SFRP1Q8N474 314 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 AGBL5Q8NDL9 886 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 OR10G6Q8NH81 332 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 JPH3Q8WXH2 748 aaPredicted RBP18.22■□□□□ 0.51
SMIM4-205ENST00000491607 RNF25Q96BH1 459 aaPredicted RBP18.22■□□□□ 0.51
SMIM4-205ENST00000491607 SGF29Q96ES7 293 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 MED8Q96G25 268 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 STN1Q9H668 368 aaKnown RBP18.22■□□□□ 0.51
SMIM4-205ENST00000491607 ZFYVE1Q9HBF4 777 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 KCNK6Q9Y257 313 aa18.22■□□□□ 0.51
SMIM4-205ENST00000491607 SCN8AQ9UQD0 1980 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 RGSL1A5PLK6 1076 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 C3orf70A6NLC5 250 aaPredicted RBP18.21■□□□□ 0.51
SMIM4-205ENST00000491607 ZNF487B1APH4 448 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 STMND1H3BQB6 276 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 PPP1R12AO14974 1030 aaPredicted RBP18.21■□□□□ 0.51
SMIM4-205ENST00000491607 DUX1O43812 170 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 SNX2O60749 519 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 MFAP3LO75121 409 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 PIRTP0C851 137 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 THRAP10827 490 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 FGF3P11487 239 aaPredicted RBP18.21■□□□□ 0.51
SMIM4-205ENST00000491607 ZFXP17010 805 aaPredicted RBP18.21■□□□□ 0.51
SMIM4-205ENST00000491607 HHEXQ03014 270 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 NFATC2Q13469 925 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 ALS2CLQ60I27 953 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 B4GALNT4Q76KP1 1039 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 NT5DC3Q86UY8 548 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 FAM129CQ86XR2 697 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 VSTM4Q8IW00 320 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 ZSCAN1Q8NBB4 408 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 IMP4Q96G21 291 aaKnown RBP18.21■□□□□ 0.51
SMIM4-205ENST00000491607 TAAR9Q96RI9 348 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 DPYSL5Q9BPU6 564 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 ARHGAP9Q9BRR9 750 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 SPATA16Q9BXB7 569 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 RMI1Q9H9A7 625 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 ARFGAP3Q9NP61 516 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 TBC1D29Q9UFV1 150 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 SHOC2Q9UQ13 582 aa18.21■□□□□ 0.51
SMIM4-205ENST00000491607 SQSTM1Q13501 440 aa18.2■□□□□ 0.5
SMIM4-205ENST00000491607 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
SMIM4-205ENST00000491607 SNAP47Q5SQN1 464 aa18.2■□□□□ 0.5
SMIM4-205ENST00000491607 TMEM71Q6P5X7 295 aa18.2■□□□□ 0.5
SMIM4-205ENST00000491607 VSIG1Q86XK7 387 aa18.2■□□□□ 0.5
SMIM4-205ENST00000491607 DTX1Q86Y01 620 aa18.2■□□□□ 0.5
SMIM4-205ENST00000491607 RHOT1Q8IXI2 618 aa18.2■□□□□ 0.5
SMIM4-205ENST00000491607 ART4Q93070 314 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms