RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 POLGP54098 1239 aaPredicted RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 VCPP55072 806 aaKnown RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 NXPH1P58417 271 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 VSNL1P62760 191 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 ACY1Q03154 408 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 PRKCZQ05513 592 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 E2F2Q14209 437 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 SLC29A2Q14542 456 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 CRYMQ14894 314 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 KARSQ15046 597 aaKnown RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 DPYSL2Q16555 572 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 HADHQ16836 314 aaKnown RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 MYLK3Q32MK0 819 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 NHSL2Q5HYW2 709 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 ZNF569Q5MCW4 686 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 MPP7Q5T2T1 576 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 TEDDM1Q5T9Z0 273 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 ALS2CLQ60I27 953 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 FCRL6Q6DN72 434 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 Q6ZNX1 250 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 ZNF627Q7L945 461 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 YTHDF3Q7Z739 585 aaKnown RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 ADGRG6Q86SQ4 1221 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 ZNF589Q86UQ0 364 aaPredicted RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 VRK3Q8IV63 474 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 DENND6AQ8IWF6 608 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 FAM217AQ8IXS0 508 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 SYCP3Q8IZU3 236 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 FBXW8Q8N3Y1 598 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 NIPA2Q8N8Q9 360 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 METTL6Q8TCB7 284 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 SLC22A17Q8WUG5 538 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 PRCCQ92733 491 aaPredicted RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 LRRC59Q96AG4 307 aaKnown RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 ARL5BQ96KC2 179 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 COQ10AQ96MF6 247 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 TRAPPC9Q96Q05 1148 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 KCNK16Q96T55 309 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 GDF15Q99988 308 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 AMBRA1Q9C0C7 1298 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 KLHL4Q9C0H6 718 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 MTMR12Q9C0I1 747 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.82□□□□□ -1.64
RTN4-215ENST00000491592 BICC1Q9H694 974 aaKnown RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 C8orf33Q9H7E9 229 aaPredicted RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 VEZTQ9HBM0 779 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 SYBUQ9NX95 663 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 RGL1Q9NZL6 768 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 APPL1Q9UKG1 709 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 AGO2Q9UKV8 859 aaKnown RBP4.82□□□□□ -1.64
RTN4-215ENST00000491592 MYO6Q9UM54 1294 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 SUFUQ9UMX1 484 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 HS3ST3A1Q9Y663 406 aa4.82□□□□□ -1.64
RTN4-215ENST00000491592 GAKO14976 1311 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 ADGRA2Q96PE1 1338 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 TMEM232C9JQI7 657 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 E7EWF7 191 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 DNM1LO00429 736 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 VWA5AO00534 786 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 TO15178 435 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 PPM1DO15297 605 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 TP73O15350 636 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 EIF3HO15372 352 aaKnown RBP eCLIP4.81□□□□□ -1.64
RTN4-215ENST00000491592 PRPF4O43172 522 aaKnown RBP eCLIP4.81□□□□□ -1.64
RTN4-215ENST00000491592 SMAD6O43541 496 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 N4BP1O75113 896 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 ENTPD3O75355 529 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 RASAL1O95294 804 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 SYF2O95926 243 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 RB1P06400 928 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 CHRM2P08172 466 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 PRR35P0CG20 571 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 NPPBP16860 134 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 GALP22466 123 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 CPT2P23786 658 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 ALDH1B1P30837 517 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 BSGP35613 385 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 LONP1P36776 959 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 ARCN1P48444 511 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 CAMLGP49069 296 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 PLCD1P51178 756 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 HSD17B4P51659 736 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 BMXP51813 675 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 RBM5P52756 815 aaKnown RBP eCLIP4.81□□□□□ -1.64
RTN4-215ENST00000491592 MRPS5P82675 430 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 PRKCEQ02156 737 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 TBL3Q12788 808 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 CAPSQ13938 189 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 CAMK1Q14012 370 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 SQLEQ14534 574 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 PDK1Q15118 436 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 RBBP5Q15291 538 aaKnown RBP4.81□□□□□ -1.64
RTN4-215ENST00000491592 MEP1BQ16820 701 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 TXNRD1Q16881 649 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 AAK1Q2M2I8 961 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 ARHGAP15Q53QZ3 475 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 ZNF628Q5EBL2 1059 aa4.81□□□□□ -1.64
RTN4-215ENST00000491592 SH2D4BQ5SQS7 431 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms