RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TIMM44O43615 452 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 KRT34O76011 436 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 SULT2A1Q06520 285 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 ITKQ08881 620 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 SLC44A4Q53GD3 710 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 METTL21CQ5VZV1 264 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 NAPRTQ6XQN6 538 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 OR6K2Q8NGY2 324 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 NECAB3Q96P71 396 aaPredicted RBP22.69■■□□□ 1.22
USF3-203ENST00000491165 MLPHQ9BV36 600 aaPredicted RBP22.69■■□□□ 1.22
USF3-203ENST00000491165 SLC25A13Q9UJS0 675 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.69■■□□□ 1.22
USF3-203ENST00000491165 TRIM13O60858 407 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 CHRM1P11229 460 aaPredicted RBP22.69■■□□□ 1.22
USF3-203ENST00000491165 IRF9Q00978 393 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 TBL3Q12788 808 aaKnown RBP22.69■■□□□ 1.22
USF3-203ENST00000491165 DLG2Q15700 870 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 HSP90AA5PQ58FG0 334 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 EGFLAMQ63HQ2 1017 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 PDSS2Q86YH6 399 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 FBXW8Q8N3Y1 598 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 FRS2Q8WU20 508 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 FAM192AQ9GZU8 254 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 CAB39LQ9H9S4 337 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 NMRAL1Q9HBL8 299 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 PAPOLBQ9NRJ5 636 aaKnown RBP22.69■■□□□ 1.22
USF3-203ENST00000491165 POMPQ9Y244 141 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 E9PBE3 544 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 ZBTB14O43829 449 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 KLHL41O60662 606 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 SORBS2O94875 1100 aaKnown RBP22.68■■□□□ 1.22
USF3-203ENST00000491165 EGFP01133 1207 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 APODP05090 189 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 CSE1LP55060 971 aaKnown RBP22.68■■□□□ 1.22
USF3-203ENST00000491165 PFKPQ01813 784 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 SLC9B1Q4ZJI4 515 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 TMEM196Q5HYL7 178 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 THEMIS2Q5TEJ8 643 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 FOXB2Q5VYV0 432 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 KCTD11Q693B1 232 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 ALG1LQ6GMV1 187 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 Q6ZVU0 165 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 GBP5Q96PP8 586 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 SEMA3CQ99985 751 aa22.68■■□□□ 1.22
USF3-203ENST00000491165 MAGEB16A2A368 324 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 INSIG1O15503 277 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 HLA-EP13747 358 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 GKP32189 559 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 SCNN1BP51168 640 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 RHOAP61586 193 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 KLF10Q13118 480 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 MPP3Q13368 585 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 PEX6Q13608 980 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 ZNF234Q14588 700 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 EIF4HQ15056 248 aaKnown RBP22.67■■□□□ 1.22
USF3-203ENST00000491165 C22orf39Q6P5X5 142 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 TPRG1Q6ZUI0 275 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 KCNMB4Q86W47 210 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 MFSD3Q96ES6 412 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 RTKNQ9BST9 563 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 CCDC28BQ9BUN5 200 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 POLR1EQ9GZS1 481 aaKnown RBP22.67■■□□□ 1.22
USF3-203ENST00000491165 C8orf33Q9H7E9 229 aaPredicted RBP22.67■■□□□ 1.22
USF3-203ENST00000491165 MID2Q9UJV3 735 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 CA14Q9ULX7 337 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 C2P06681 752 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 F7P08709 466 aaPredicted RBP22.67■■□□□ 1.22
USF3-203ENST00000491165 ZCCHC18P0CG32 403 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 CALRP27797 417 aaKnown RBP22.67■■□□□ 1.22
USF3-203ENST00000491165 CD86P42081 329 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 SEC13P55735 322 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 ITPRIPL1Q6GPH6 555 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 RNF111Q6ZNA4 994 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 HPS6Q86YV9 775 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 ERLEC1Q96DZ1 483 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 IMP4Q96G21 291 aaKnown RBP22.67■■□□□ 1.22
USF3-203ENST00000491165 FCRL5Q96RD9 977 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 TUBGCP5Q96RT8 1024 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 KLHL4Q9C0H6 718 aa22.67■■□□□ 1.22
USF3-203ENST00000491165 C20orf96Q9NUD7 363 aaPredicted RBP22.67■■□□□ 1.22
USF3-203ENST00000491165 ATP9BO43861 1147 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 BNIP3LO60238 219 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 IL12RB1P42701 662 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 KIR2DL1P43626 348 aaPredicted RBP22.66■■□□□ 1.22
USF3-203ENST00000491165 ABCG1P45844 678 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 NPY2RP49146 381 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 XIAPP98170 497 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 TCHHL1Q5QJ38 904 aaPredicted RBP22.66■■□□□ 1.22
USF3-203ENST00000491165 CERCAMQ5T4B2 595 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 ACAD11Q709F0 780 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 SLC25A51Q9H1U9 297 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 ADAMTS6Q9UKP5 1117 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 CXorf51AA0A1B0GTR3 108 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 EME2A4GXA9 379 aaPredicted RBP22.66■■□□□ 1.22
USF3-203ENST00000491165 KRBA1A5PL33 1030 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 APOA4P06727 396 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 MTTPP55157 894 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 MAPK15Q8TD08 544 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 VPS39Q96JC1 886 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 ILKAPQ9H0C8 392 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms