RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 BDP1A6H8Y1 2624 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 A0A0U1RQS6 177 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 ZCWPW2A0A1B0GU75 182 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 EXOC1LA0A1B0GW35 172 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 TCRBV9S1A1TA0A576 114 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 PRR5-ARHGAP8B1AHC4 643 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 QSOX1O00391 747 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 RIPK2O43353 540 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 LATO43561 262 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 SLC25A14O95258 325 aaPredicted RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 INHBAP08476 426 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 SP9P0CG40 484 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 ZNF7P17097 686 aaPredicted RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 MSH3P20585 1137 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 TEAD1P28347 426 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 RABIFP47224 123 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 DHPSP49366 369 aaPredicted RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 DMWDQ09019 674 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 SIM2Q14190 667 aaPredicted RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 PTK2BQ14289 1009 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 PTPRCAPQ14761 206 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 IRF4Q15306 451 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 TEAD4Q15561 434 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 CHRNA6Q15825 494 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 HSP90AA5PQ58FG0 334 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 HENMT1Q5T8I9 393 aaKnown RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 LGSNQ5TDP6 509 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 LYSMD4Q5XG99 296 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 PNCKQ6P2M8 343 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 ADAMTSL4Q6UY14 1074 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 PRR23BQ6ZRT6 265 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 KIAA0408Q6ZU52 694 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 CYS1Q717R9 158 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 RABEPKQ7Z6M1 372 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 CROCCP2Q86T23 111 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 SLC26A11Q86WA9 606 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 IGDCC3Q8IVU1 814 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 RBFAQ8N0V3 343 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 MREGQ8N565 214 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 FBF1Q8TES7 1133 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 SCAMP4Q969E2 229 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 BIRC7Q96CA5 298 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 HIC2Q96JB3 615 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 ZNF778Q96MU6 729 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 VPS35Q96QK1 796 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 COPS8Q99627 209 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 MYOCQ99972 504 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 MIR1-1HGQ9H1L0 117 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 ACBD3Q9H3P7 528 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 SUDS3Q9H7L9 328 aaPredicted RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 LRRC4CQ9HCJ2 640 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 IARS2Q9NSE4 1012 aaKnown RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 INTS10Q9NVR2 710 aaKnown RBP10.88□□□□□ -0.67
VARS2-210ENST00000490699 SMOXQ9NWM0 555 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 HS3ST3A1Q9Y663 406 aa10.88□□□□□ -0.67
VARS2-210ENST00000490699 KMT2EQ8IZD2 1858 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 SCN8AQ9UQD0 1980 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 A0A1W2PPC4 97 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 UBA6A0AVT1 1052 aaPredicted RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 GOLGA6L10A6NI86 522 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 CCL22O00626 93 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ASMTLO95671 621 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ERVK-10P10266 1014 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 TDGF1P13385 188 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 PSMA3P25788 255 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 MSH2P43246 934 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ARSDP51689 593 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 EIF3BP55884 814 aaKnown RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 YPEL5P62699 121 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 OVGP1Q12889 678 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ITIH4Q14624 930 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 UAP1Q16222 522 aaPredicted RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 WSCD2Q2TBF2 565 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ATP13A5Q4VNC0 1218 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 LRRC6Q86X45 466 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 DCP2Q8IU60 420 aaKnown RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 TMEFF1Q8IYR6 380 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 AGGF1Q8N302 714 aaeCLIP10.87□□□□□ -0.67
VARS2-210ENST00000490699 NXPE1Q8N323 547 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 PPM1NQ8N819 430 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 TP53I13Q8NBR0 393 aaPredicted RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 GPR150Q8NGU9 434 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 BTN2A2Q8WVV5 523 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 GLYATL1Q969I3 302 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 EID2BQ96D98 161 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 FCRL3Q96P31 734 aaPredicted RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 CPNE1Q99829 537 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 CLPBQ9H078 707 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 ZDHHC3Q9NYG2 299 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 MBD1Q9UIS9 605 aaPredicted RBP10.87□□□□□ -0.67
VARS2-210ENST00000490699 PLXNA2O75051 1894 aa10.87□□□□□ -0.67
VARS2-210ENST00000490699 GPR89AB7ZAQ6 455 aa10.86□□□□□ -0.67
VARS2-210ENST00000490699 GOLGA8KD6RF30 607 aa10.86□□□□□ -0.67
VARS2-210ENST00000490699 H3BMM5 538 aa10.86□□□□□ -0.67
VARS2-210ENST00000490699 GOLGA8TH3BQL2 631 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms