RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 SUOXP51687 545 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 ZNF140P52738 457 aaPredicted RBP18.11■□□□□ 0.49
SRM-206ENST00000490101 PTPRRQ15256 657 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 RASA2Q15283 850 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 UGP2Q16851 508 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 HLA-BQ31612 363 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 TTC31Q49AM3 519 aaPredicted RBP18.11■□□□□ 0.49
SRM-206ENST00000490101 FAM46CQ5VWP2 391 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 ZNF776Q68DI1 518 aaPredicted RBP18.11■□□□□ 0.49
SRM-206ENST00000490101 PDPK2PQ6A1A2 396 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 RAB44Q7Z6P3 723 aaPredicted RBP18.11■□□□□ 0.49
SRM-206ENST00000490101 TDRPQ86YL5 185 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 GANCQ8TET4 914 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 BTBD1Q9H0C5 482 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 PCED1AQ9H1Q7 454 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 TM7SF3Q9NS93 570 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 NLE1Q9NVX2 485 aaPredicted RBP18.11■□□□□ 0.49
SRM-206ENST00000490101 VPS18Q9P253 973 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 SLC24A2Q9UI40 661 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.11■□□□□ 0.49
SRM-206ENST00000490101 ARL5AQ9Y689 179 aa18.11■□□□□ 0.49
SRM-206ENST00000490101 NBEAQ8NFP9 2946 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 CCDC78A2IDD5 438 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 SLC7A4O43246 635 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 RNASEH1O60930 286 aaKnown RBP18.1■□□□□ 0.49
SRM-206ENST00000490101 C7P10643 843 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 AFF3P51826 1226 aaKnown RBP18.1■□□□□ 0.49
SRM-206ENST00000490101 NAB1Q13506 487 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 KBTBD12Q3ZCT8 623 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 CEP85LQ5SZL2 805 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 CRTC1Q6UUV9 634 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 IL27RAQ6UWB1 636 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 LAYNQ6UX15 382 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 PARS2Q7L3T8 475 aaKnown RBP18.1■□□□□ 0.49
SRM-206ENST00000490101 LYSMD3Q7Z3D4 306 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 UNC5BQ8IZJ1 945 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 OR13J1Q8NGT2 312 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 C1orf216Q8TAB5 229 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 ARRDC3Q96B67 414 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 PPP1R16AQ96I34 528 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 SH3GL2Q99962 352 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 GPR63Q9BZJ6 419 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 SMYD2Q9NRG4 433 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 C20orf96Q9NUD7 363 aaPredicted RBP18.1■□□□□ 0.49
SRM-206ENST00000490101 IL17CQ9P0M4 197 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 PCOLCE2Q9UKZ9 415 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 CACNA1GO43497 2377 aa18.1■□□□□ 0.49
SRM-206ENST00000490101 NPIPB15A6NHN6 443 aaPredicted RBP18.09■□□□□ 0.49
SRM-206ENST00000490101 FAM47DPA6NHR8 397 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 SRRM3A6NNA2 597 aaPredicted RBP18.09■□□□□ 0.49
SRM-206ENST00000490101 RASGRF2O14827 1237 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 OPA1O60313 960 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 VAPBO95292 243 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 IL1BP01584 269 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 CYP2A6P11509 494 aaPredicted RBP18.09■□□□□ 0.49
SRM-206ENST00000490101 ARNTP27540 789 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 GCAP28676 217 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 HMGCLP35914 325 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 ZBTB16Q05516 673 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 KIF19Q2TAC6 998 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 KRT71Q3SY84 523 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 MARK2Q7KZI7 788 aaKnown RBP18.09■□□□□ 0.49
SRM-206ENST00000490101 TTC7BQ86TV6 843 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 LRRC6Q86X45 466 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 MMAAQ8IVH4 418 aaKnown RBP18.09■□□□□ 0.49
SRM-206ENST00000490101 CDKL2Q92772 493 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 BIRC7Q96CA5 298 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 DNAJC1Q96KC8 554 aaKnown RBP18.09■□□□□ 0.49
SRM-206ENST00000490101 DHRS4Q9BTZ2 278 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 HDAC8Q9BY41 377 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 ZFYVE1Q9HBF4 777 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 TM9SF3Q9HD45 589 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 PCDH12Q9NPG4 1184 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 B4GALT6Q9UBX8 382 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 NCKAP1Q9Y2A7 1128 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 SNX11Q9Y5W9 270 aa18.09■□□□□ 0.49
SRM-206ENST00000490101 C1orf232A0A0U1RR37 186 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 CXorf49A8MYA2 514 aaPredicted RBP18.08■□□□□ 0.48
SRM-206ENST00000490101 STX7O15400 261 aaKnown RBP18.08■□□□□ 0.48
SRM-206ENST00000490101 BUD23O43709 281 aaKnown RBP18.08■□□□□ 0.48
SRM-206ENST00000490101 CBFA2T3O75081 653 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 ADH1BP00325 375 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 ERVK-10P10266 1014 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.48
SRM-206ENST00000490101 VIPR1P32241 457 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 ARSDP51689 593 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 EFTUD2Q15029 972 aaKnown RBP eCLIP18.08■□□□□ 0.483e-7■■■■■ 52.3
SRM-206ENST00000490101 TEAD4Q15561 434 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 CST6Q15828 149 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 TEDDM1Q5T9Z0 273 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 DPPA4Q7L190 304 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 KCNMB4Q86W47 210 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 RIBC1Q8N443 379 aaPredicted RBP18.08■□□□□ 0.48
SRM-206ENST00000490101 OR4K2Q8NGD2 314 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 OR13C4Q8NGS5 318 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 EPS8L3Q8TE67 593 aaKnown RBP18.08■□□□□ 0.48
SRM-206ENST00000490101 SLC44A1Q8WWI5 657 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 HDAC10Q969S8 669 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 EID2BQ96D98 161 aa18.08■□□□□ 0.48
SRM-206ENST00000490101 CDKN2AIPNLQ96HQ2 116 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms