RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ARL14Q8N4G2 192 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 SLC25A41Q8N5S1 370 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 GPR26Q8NDV2 337 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 OR6C4Q8NGE1 309 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 WDR36Q8NI36 951 aaKnown RBP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 SCARF2Q96GP6 870 aaPredicted RBP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 TEKT5Q96M29 485 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 SLC46A1Q96NT5 459 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 QKIQ96PU8 341 aaKnown RBP eCLIP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 FAM118BQ9BPY3 351 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 SPATA16Q9BXB7 569 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 LACRTQ9GZZ8 138 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 RDH14Q9HBH5 336 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 BPIFA1Q9NP55 256 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 LUC7LQ9NQ29 371 aaKnown RBP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 KLHL8Q9P2G9 620 aaPredicted RBP13.91□□□□□ -0.18
VTI1A-206ENST00000489142 APPL1Q9UKG1 709 aa13.91□□□□□ -0.18
VTI1A-206ENST00000489142 PTPRQQ9UMZ3 2332 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 A0A0U1RQJ8 604 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 MACROD2A1Z1Q3 448 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 B4GAT1O43505 415 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 NUDT21O43809 227 aaKnown RBP13.9□□□□□ -0.18
VTI1A-206ENST00000489142 DNAJC6O75061 913 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 NDST3O95803 873 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 PYGLP06737 847 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 ACP5P13686 325 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 FECHP22830 423 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 CHRNA4P43681 627 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 NR2C2P49116 596 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 BIRC2Q13490 618 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 MAP9Q49MG5 647 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 PHF19Q5T6S3 580 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 NKAIN2Q5VXU1 208 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 KDELC1Q6UW63 502 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 USP53Q70EK8 1073 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 BZW1Q7L1Q6 419 aaKnown RBP13.9□□□□□ -0.18
VTI1A-206ENST00000489142 CHST15Q7LFX5 561 aaPredicted RBP13.9□□□□□ -0.18
VTI1A-206ENST00000489142 NLRP8Q86W28 1048 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 TMTC1Q8IUR5 882 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 LSMEM2Q8N112 164 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 ZNF567Q8N184 647 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 SPC24Q8NBT2 197 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 ZNF248Q8NDW4 579 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 RBM41Q96IZ5 413 aaKnown RBP13.9□□□□□ -0.18
VTI1A-206ENST00000489142 GPR63Q9BZJ6 419 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 SEMA6CQ9H3T2 930 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 THSD1Q9NS62 852 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 WDR70Q9NW82 654 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 TRIM10Q9UDY6 481 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 KCNK6Q9Y257 313 aa13.9□□□□□ -0.18
VTI1A-206ENST00000489142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
VTI1A-206ENST00000489142 H7C0C1 242 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 PLD2O14939 933 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 PPM1DO15297 605 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 SNX2O60749 519 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 IPO7O95373 1038 aaKnown RBP13.89□□□□□ -0.19
VTI1A-206ENST00000489142 ITIH1P19827 911 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 CTNNA1P35221 906 aaKnown RBP13.89□□□□□ -0.19
VTI1A-206ENST00000489142 ATP5OP48047 213 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 WNT3AP56704 352 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 ERVPABLB-1P60509 514 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 TLE3Q04726 772 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 PLA2G4EQ3MJ16 856 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 CRTC3Q6UUV7 619 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 RAB11FIP2Q7L804 512 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 PID1Q7Z2X4 250 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 TMC3Q7Z5M5 1100 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 C17orf82Q86X59 251 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-206ENST00000489142 JAMLQ86YT9 394 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 FBXO39Q8N4B4 442 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 IPMKQ8NFU5 416 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 KCNE4Q8WWG9 221 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 HTR3CQ8WXA8 447 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 GRAMD1AQ96CP6 724 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 LIN37Q96GY3 246 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-206ENST00000489142 OXNAD1Q96HP4 312 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-206ENST00000489142 MRGPRX2Q96LB1 330 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 FCRL3Q96P31 734 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-206ENST00000489142 BBC3Q96PG8 261 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-206ENST00000489142 NUDT22Q9BRQ3 303 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 DESI2Q9BSY9 194 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 OR2AG1Q9H205 316 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 CPNE5Q9HCH3 593 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 MAGEE1Q9HCI5 957 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 ATXN10Q9UBB4 475 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 PISDQ9UG56 409 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 FAM153AQ9UHL3 310 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 PCDHGA8Q9Y5G5 932 aa13.89□□□□□ -0.19
VTI1A-206ENST00000489142 GRID2IPA4D2P6 1211 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 CDRT15L2A8MXV6 281 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 KLK10O43240 276 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 MTX2O75431 263 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 SLC25A14O95258 325 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-206ENST00000489142 PNLIPP16233 465 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 ZNF8P17098 575 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-206ENST00000489142 BPIP17213 487 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 MPSTP25325 297 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 RBL1P28749 1068 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms