RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TRAF2Q12933 501 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 DNASE1L3Q13609 305 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 PRR30Q53SZ7 412 aaPredicted RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 TRIM72Q6ZMU5 477 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 PHF13Q86YI8 300 aaPredicted RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 TICAM1Q8IUC6 712 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 SRRM1Q8IYB3 904 aaKnown RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 PGBD5Q8N414 524 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 NPWQ8N729 165 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 COX14Q96I36 57 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 MCEEQ96PE7 176 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 SMIM14Q96QK8 99 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 CNPY3Q9BT09 278 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 SLC25A23Q9BV35 468 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 LNPEPQ9UIQ6 1025 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 KCNK6Q9Y257 313 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 A6NCN8 305 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 WIPF3A6NGB9 483 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
USP48-210ENST00000489108 SPAG6O75602 509 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 C9P02748 559 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 ATP1A1P05023 1023 aaKnown RBP16.01■□□□□ 0.15
USP48-210ENST00000489108 CALB1P05937 261 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 TNFRSF8P28908 595 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 CASP14P31944 242 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 CCL11P51671 97 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 PTSQ03393 145 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 CHAF1BQ13112 559 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 IL11RAQ14626 422 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 TMCO4Q5TGY1 634 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 CPZQ66K79 652 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 CT55Q8WUE5 264 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 TCTN2Q96GX1 697 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 MCCC1Q96RQ3 725 aaPredicted RBP16.01■□□□□ 0.15
USP48-210ENST00000489108 NUDCD1Q96RS6 583 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 EPB41L1Q9H4G0 881 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 MLXIPLQ9NP71 852 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 OGFRQ9NZT2 677 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 LUZP4Q9P127 313 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 CPNE7Q9UBL6 633 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 ERRFI1Q9UJM3 462 aaPredicted RBP16.01■□□□□ 0.15
USP48-210ENST00000489108 AP4E1Q9UPM8 1137 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 ABCA12Q86UK0 2595 aa16.01■□□□□ 0.15
USP48-210ENST00000489108 ANKRD62A6NC57 917 aa16■□□□□ 0.15
USP48-210ENST00000489108 PGLSO95336 258 aa16■□□□□ 0.15
USP48-210ENST00000489108 ACP5P13686 325 aa16■□□□□ 0.15
USP48-210ENST00000489108 F3P13726 295 aa16■□□□□ 0.15
USP48-210ENST00000489108 TYRP1P17643 537 aa16■□□□□ 0.15
USP48-210ENST00000489108 GARSP41250 739 aaKnown RBP16■□□□□ 0.15
USP48-210ENST00000489108 OGDHQ02218 1023 aa16■□□□□ 0.15
USP48-210ENST00000489108 ZNF235Q14590 738 aa16■□□□□ 0.15
USP48-210ENST00000489108 CLEC16AQ2KHT3 1053 aa16■□□□□ 0.15
USP48-210ENST00000489108 LRRC66Q68CR7 880 aa16■□□□□ 0.15
USP48-210ENST00000489108 DNAJC24Q6P3W2 148 aa16■□□□□ 0.15
USP48-210ENST00000489108 RFX8Q6ZV50 586 aa16■□□□□ 0.15
USP48-210ENST00000489108 USP45Q70EL2 814 aa16■□□□□ 0.15
USP48-210ENST00000489108 NLRP8Q86W28 1048 aa16■□□□□ 0.15
USP48-210ENST00000489108 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
USP48-210ENST00000489108 PIH1D2Q8WWB5 315 aa16■□□□□ 0.15
USP48-210ENST00000489108 TGM7Q96PF1 710 aa16■□□□□ 0.15
USP48-210ENST00000489108 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
USP48-210ENST00000489108 RUFY1Q96T51 708 aa16■□□□□ 0.15
USP48-210ENST00000489108 HERPUD2Q9BSE4 406 aa16■□□□□ 0.15
USP48-210ENST00000489108 RIOK2Q9BVS4 552 aaKnown RBP16■□□□□ 0.15
USP48-210ENST00000489108 GANQ9H2C0 597 aa16■□□□□ 0.15
USP48-210ENST00000489108 ACTL8Q9H568 366 aa16■□□□□ 0.15
USP48-210ENST00000489108 AKIRIN1Q9H9L7 192 aaPredicted RBP16■□□□□ 0.15
USP48-210ENST00000489108 LHX9Q9NQ69 397 aa16■□□□□ 0.15
USP48-210ENST00000489108 PPIL1Q9Y3C6 166 aa16■□□□□ 0.15
USP48-210ENST00000489108 SLC30A1Q9Y6M5 507 aa16■□□□□ 0.15
USP48-210ENST00000489108 DOPEY1Q5JWR5 2465 aa16■□□□□ 0.15
USP48-210ENST00000489108 KIR2DS5A0A0G2JLQ3 304 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 A0A0G2JNG1 304 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 KIR2DS3K7RE56 304 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 PEX11BO96011 259 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 LDLRP01130 860 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 FGF5P12034 268 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 SOX5P35711 763 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 LEPRP48357 1165 aaKnown RBP15.99■□□□□ 0.15
USP48-210ENST00000489108 MAXP61244 160 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 KIR2DS5Q14953 304 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 CAMK4Q16566 473 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 PPP1R15BQ5SWA1 713 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 ERMARDQ5T6L9 678 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 ARMC12Q5T9G4 340 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 C1QL3Q5VWW1 255 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 MON1BQ7L1V2 547 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 EXD1Q8NHP7 514 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 ZNF599Q96NL3 588 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 PHF12Q96QT6 1004 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 MAP10Q9P2G4 905 aa15.99■□□□□ 0.15
USP48-210ENST00000489108 CNOT6Q9ULM6 557 aaKnown RBP15.99■□□□□ 0.15
USP48-210ENST00000489108 PCDHGA9Q9Y5G4 932 aaKnown RBP15.99■□□□□ 0.15
USP48-210ENST00000489108 LILRA5A6NI73 299 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 ARGFXA6NJG6 315 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 OR5K4A6NMS3 321 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 KIF1CO43896 1103 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms