RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 BICD1Q96G01 975 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 TMEM68Q96MH6 324 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 NR1H4Q96RI1 486 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 CTAGE1Q96RT6 745 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 FAM110AQ9BQ89 295 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 NDST4Q9H3R1 872 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 PLEKHA4Q9H4M7 779 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 CNGB3Q9NQW8 809 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 OCIAD1Q9NX40 245 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 ZNF112Q9UJU3 913 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 LSM4Q9Y4Z0 139 aaKnown RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 SNX9Q9Y5X1 595 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 STON1Q9Y6Q2 735 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 CACNA1GO43497 2377 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 ALS2Q96Q42 1657 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 IGSF1Q8N6C5 1336 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 METP08581 1390 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 TRPM1Q7Z4N2 1603 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 THSD7BQ9C0I4 1608 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 LTBP1Q14766 1721 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 IFT172Q9UG01 1749 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 CPED1A4D0V7 1026 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 RFPL2O75678 378 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 TSPY4P0CV99 314 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 TSPY10P0CW01 314 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 UBL4AP11441 157 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 ITGAXP20702 1163 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 EPHA8P29322 1005 aaPredicted RBP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 BSGP35613 385 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 METAP2P50579 478 aaKnown RBP eCLIP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 CLCNKAP51800 687 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 SEC61BP60468 96 aaKnown RBP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 ZBED6P86452 979 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 SORDQ00796 357 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 OLIG2Q13516 323 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 NAE1Q13564 534 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 DLK2Q6UY11 383 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 DSTYKQ6XUX3 929 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 TAOK1Q7L7X3 1001 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 R3HCC1LQ7Z5L2 792 aaKnown RBP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 SFR1Q86XK3 245 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 WDR63Q8IWG1 891 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 DHX40Q8IX18 779 aaKnown RBP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 DIS3L2Q8IYB7 885 aaKnown RBP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 WFIKKN2Q8TEU8 576 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 CREB3L4Q8TEY5 395 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 SGCDQ92629 289 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 GTF3C6Q969F1 213 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 C7orf26Q96N11 449 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 MAP7D2Q96T17 732 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 EIF2AK1Q9BQI3 630 aaKnown RBP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 TMEM47Q9BQJ4 181 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 HEMGNQ9BXL5 484 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 ZHX3Q9H4I2 956 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 PCDH9Q9HC56 1237 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 GPR108Q9NPR9 543 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 MCM9Q9NXL9 1143 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 ZNF224Q9NZL3 707 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 ZNF69Q9UC07 566 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 SIX4Q9UIU6 781 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 CNTNAP2Q9UHC6 1331 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 TRIP12Q14669 1992 aaPredicted RBP4.36□□□□□ -1.71
ITGB1-214ENST00000488427 HFM1A2PYH4 1435 aa4.36□□□□□ -1.71
ITGB1-214ENST00000488427 TRPM3Q9HCF6 1732 aaPredicted RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 A0A1W2PQM1 296 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 CLGNO14967 610 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 RTN3O95197 1032 aaPredicted RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 IPO7O95373 1038 aaKnown RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 ZNF182P17025 639 aaPredicted RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 MAOAP21397 527 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 CHMP24386 653 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SHMT1P34896 483 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 HARS2P49590 506 aaKnown RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 CCR9P51686 369 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 OLR1P78380 273 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 TFAP4Q01664 338 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 LRMPQ12912 555 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 GRIK3Q13003 919 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 G3BP1Q13283 466 aaKnown RBP eCLIP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 DHX34Q14147 1143 aaKnown RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 OASLQ15646 514 aaKnown RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 MMEL1Q495T6 779 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 C9orf57Q5W0N0 161 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SIGIRRQ6IA17 410 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 RHBDF2Q6PJF5 856 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 C16orf82Q7Z2V1 217 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SMRP1Q8NCR6 262 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 METTL6Q8TCB7 284 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 DNAAF4Q8WXU2 420 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 MOAP1Q96BY2 351 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SLC41A2Q96JW4 573 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 C1QTNF4Q9BXJ3 329 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 AGXT2Q9BYV1 514 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 MKKSQ9NPJ1 570 aaPredicted RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 HINT3Q9NQE9 182 aaKnown RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SLC6A13Q9NSD5 602 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 DIAPH3Q9NSV4 1193 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 KDM3AQ9Y4C1 1321 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SBNO1A3KN83 1393 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms