RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 POLR1CO15160 346 aaPredicted RBP19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 TRBC1P01850 177 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 ATP1A1P05023 1023 aaKnown RBP19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 PCK1P35558 622 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 EPHA4P54764 986 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 SEPT6Q14141 434 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 TEX26Q8N6G2 289 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 HSPH1Q92598 858 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 MIB2Q96AX9 1013 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 SH3KBP1Q96B97 665 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 SIDT1Q9NXL6 827 aaKnown RBP19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 VPS18Q9P253 973 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 KCNK6Q9Y257 313 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 FTLP02792 175 aaPredicted RBP19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 F8A1P23610 371 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 MYL5Q02045 173 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 MAP7Q14244 749 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 IHHQ14623 411 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 SLC9B2Q86UD5 537 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 ESX1Q8N693 406 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 ZNF653Q96CK0 615 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 PSMG3-AS1Q96PY0 264 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 HERPUD2Q9BSE4 406 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 TBC1D10AQ9BXI6 508 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 CNOT6Q9ULM6 557 aaKnown RBP19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 MYO6Q9UM54 1294 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 TP53TG5Q9Y2B4 290 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 RPS6KL1Q9Y6S9 549 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 SCINQ9Y6U3 715 aa19.26■□□□□ 0.67
SMPDL3A-202ENST00000487215 SPENQ96T58 3664 aaKnown RBP19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 SNX2O60749 519 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 RARAP10276 462 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 ACP5P13686 325 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 NR1D1P20393 614 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 SERPINB6P35237 376 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 EPHB1P54762 984 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 ITKQ08881 620 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 KLRB1Q12918 225 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 BOLA3Q53S33 107 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 POLR1EQ9GZS1 481 aaKnown RBP19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 MYO1AQ9UBC5 1043 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 KCTD3Q9Y597 815 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 KCNMB2Q9Y691 235 aa19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 MN1Q10571 1320 aaPredicted RBP19.25■□□□□ 0.67
SMPDL3A-202ENST00000487215 LRRC53A6NM62 1247 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 K7EM74 188 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 MTSS1O43312 755 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 CLDN7O95471 211 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 ANKRD34CP0C6C1 535 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 GZMAP12544 262 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 F3P13726 295 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 SLC2A4P14672 509 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 ZNF28P17035 718 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 CDK11BP21127 795 aaKnown RBP19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 NOP2P46087 812 aaKnown RBP19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 CD97P48960 835 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 TXNRD3NBQ6F5E7 133 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 RBM43Q6ZSC3 357 aaKnown RBP19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 LYSMD3Q7Z3D4 306 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 ZNF571Q7Z3V5 609 aaPredicted RBP19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 RNF31Q96EP0 1072 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 WDR24Q96S15 920 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 TDRD1Q9BXT4 1180 aaKnown RBP19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 EPB41L1Q9H4G0 881 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 HAUS4Q9H6D7 363 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 PCDH18Q9HCL0 1135 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 CPNE7Q9UBL6 633 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 DNPEPQ9ULA0 475 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 CHKBQ9Y259 395 aa19.24■□□□□ 0.67
SMPDL3A-202ENST00000487215 KIR2DS5A0A0G2JLQ3 304 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 A0A0G2JNG1 304 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 BLACEA4D250 179 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 FADS2P1A8MWK0 482 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 KIR2DS3K7RE56 304 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 DDX3XO00571 662 aaKnown RBP eCLIP19.23■□□□□ 0.675e-7■■■■□ 23
SMPDL3A-202ENST00000487215 DLSTP36957 453 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 ANP32AP39687 249 aaKnown RBP19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 GFERP55789 205 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 DSC2Q02487 901 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 KIR2DS5Q14953 304 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 ASIC2Q16515 512 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 ALG1LQ6GMV1 187 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 PLXDC1Q8IUK5 500 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 RAVER1Q8IY67 606 aaKnown RBP19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 ULBP3Q9BZM4 244 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 RMI1Q9H9A7 625 aa19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 MRPL47Q9HD33 250 aaKnown RBP19.23■□□□□ 0.67
SMPDL3A-202ENST00000487215 NBASA2RRP1 2371 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 LILRA5A6NI73 299 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 PRLP01236 227 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 UBE2IP63279 158 aaKnown RBP19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 FOXM1Q08050 763 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 HENMT1Q5T8I9 393 aaKnown RBP19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 E4F1Q66K89 784 aaPredicted RBP19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 ATCAYQ86WG3 371 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms