RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 H3BMM5 538 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 TRIM13O60858 407 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 TBX10O75333 385 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PRAMEF1O95521 474 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ESR1P03372 595 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CCDC166P0CW27 439 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF7P17097 686 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 POU3F3P20264 500 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 FMO4P31512 558 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 OPRD1P41143 372 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 GRIA2P42262 883 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 SKIV2L2P42285 1042 aaKnown RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 SUOXP51687 545 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ADARP55265 1226 aaKnown RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 XIAPP98170 497 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 BST1Q10588 318 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ITGA9Q13797 1035 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CSHL1Q14406 222 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 SEMA3AQ14563 771 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF234Q14588 700 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF460Q14592 562 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ACAP2Q15057 778 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PTPRRQ15256 657 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CDKN3Q16667 212 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 LRIT3Q3SXY7 679 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 LRRC66Q68CR7 880 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PSAPL1Q6NUJ1 521 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ERAP2Q6P179 960 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 SERPINA13PQ6UXR4 307 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ZYG11AQ6WRX3 759 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CCDC121Q6ZUS5 278 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 C10orf107Q8IVU9 208 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 SUGP1Q8IWZ8 645 aaKnown RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CENPLQ8N0S6 344 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 RBFAQ8N0V3 343 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 FSTL5Q8N475 847 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 NKAPQ8N5F7 415 aaKnown RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 TMIEQ8NEW7 156 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 HEXDCQ8WVB3 486 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 NXPE3Q969Y0 559 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 NXNL1Q96CM4 212 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 MSLNLQ96KJ4 702 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 C7orf26Q96N11 449 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PLEKHG4BQ96PX9 1271 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 OLFM1Q99784 485 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 MECRQ9BV79 373 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PLA2G2FQ9BZM2 168 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CLPBQ9H078 707 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CDH19Q9H159 772 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 POMKQ9H5K3 350 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 FAM96AQ9H5X1 160 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 SLCO1B3Q9NPD5 702 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 DYRK4Q9NR20 520 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 B4GALT6Q9UBX8 382 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 TRMT6Q9UJA5 497 aaKnown RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 MTCH2Q9Y6C9 303 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 USH1CQ9Y6N9 552 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PLXNB3Q9ULL4 1909 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 CHD7Q9P2D1 2997 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 ATXN2Q99700 1313 aaKnown RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PLXNA2O75051 1894 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 TRBV5-4A0A0C4DH59 114 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 CCDC189A1A4V9 331 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 OTOL1A6NHN0 477 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 CCT8L1PA6NM43 557 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 C16orf96A6NNT2 1141 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 A8MX80 341 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 C1QTNF3-AMACRE9PGA6 284 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 G3V2L1 256 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 KPNA3O00505 521 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 PRMT5O14744 637 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 NPC1O15118 1278 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 SMIM24O75264 130 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 SNNO75324 88 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 DCTN3O75935 186 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 SNUPNO95149 360 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 KAT7O95251 611 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 RECKO95980 971 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 PRSS56P0CW18 603 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 FGF3P11487 239 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 TIMP2P16035 220 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 BPIP17213 487 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 IGFBP4P22692 258 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 RPS3P23396 243 aaKnown RBP eCLIP7□□□□□ -1.294e-8■■□□□ 13.1
SF3A3-206ENST00000487062 SP100P23497 879 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 ATP5F1P24539 256 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 GMPRP36959 345 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 TNFRSF4P43489 277 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 GLRBP48167 497 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 SLC1A6P48664 564 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 SPINT3P49223 89 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 CDKN1CP49918 316 aaPredicted RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 CDKN2DP55273 166 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 HNRNPH2P55795 449 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 ABCE1P61221 599 aaKnown RBP7□□□□□ -1.29
SF3A3-206ENST00000487062 ATP6V0D1P61421 351 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 PTSQ03393 145 aa7□□□□□ -1.29
SF3A3-206ENST00000487062 DLX2Q07687 328 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms