RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TTC4O95801 387 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 TOP3BO95985 862 aaKnown RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 GOT2P00505 430 aaKnown RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A6P19224 532 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A1P22309 533 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A4P22310 534 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 MC4RP32245 332 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A3P35503 534 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A5P35504 534 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 SPAM1P38567 509 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 CDKN1CP49918 316 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 PMS2P54278 862 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 SHC2P98077 582 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 RPL6Q02878 288 aaKnown RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 SGCGQ13326 291 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 AGERQ15109 404 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 PSAPL1Q6NUJ1 521 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 TRMT10BQ6PF06 316 aaKnown RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 FAM151BQ6UXP7 276 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 KDM7AQ6ZMT4 941 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 C3orf62Q6ZUJ4 267 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 RAVER1Q8IY67 606 aaKnown RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 TMEFF1Q8IYR6 380 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 TP53I13Q8NBR0 393 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 PLA2G15Q8NCC3 412 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 OR6P1Q8NGX9 317 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 ASB12Q8WXK4 309 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 PEX13Q92968 403 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 CAVIN3Q969G5 261 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 CENPTQ96BT3 561 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 AP2M1Q96CW1 435 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 NUS1Q96E22 293 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 SPACA7Q96KW9 195 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 KLF6Q99612 283 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-229ENST00000486665 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 ORAI3Q9BRQ5 295 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 EDEM2Q9BV94 578 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 EPB41L4BQ9H329 900 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A7Q9HAW7 530 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A10Q9HAW8 530 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A8Q9HAW9 530 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 FZD3Q9NPG1 666 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 TMPRSS11EQ9UL52 423 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 BPTFQ12830 3046 aa12.71□□□□□ -0.38
HDAC6-229ENST00000486665 GLYATL1P3A0A0U1RQE8 302 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 LNP1A1A4G5 178 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 GPR39O43194 453 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 SRP72O76094 671 aaKnown RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 ACSL3O95573 720 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 SOD1P00441 154 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 ERVK-10P10266 1014 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 SPINK2P20155 84 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 HADHAP40939 763 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 DCDC1P59894 354 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 DPTQ07507 201 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 LRRC14Q15048 493 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 BRD3Q15059 726 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 UAP1Q16222 522 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 LONRF1Q17RB8 773 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 HENMT1Q5T8I9 393 aaKnown RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 EMBQ6PCB8 327 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 TRMT10CQ7L0Y3 403 aaKnown RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 ZNF765Q7L2R6 523 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 PTAR1Q7Z6K3 402 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 NLRP8Q86W28 1048 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 SLC41A1Q8IVJ1 513 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 CADM4Q8NFZ8 388 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 OR4L1Q8NH43 312 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 UHMK1Q8TAS1 419 aaKnown RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 GSDMBQ8TAX9 411 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 ZNF398Q8TD17 642 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 LENG8Q96PV6 779 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 MYOCQ99972 504 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 SPATA16Q9BXB7 569 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 VPS37BQ9H9H4 285 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 SMYD2Q9NRG4 433 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 RAD18Q9NS91 495 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 C20orf96Q9NUD7 363 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 MOCS1Q9NZB8 636 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 MARCH4Q9P2E8 410 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 NFKBIL1Q9UBC1 381 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 CNOT6Q9ULM6 557 aaKnown RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 CA5BQ9Y2D0 317 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-229ENST00000486665 SLCO1B1Q9Y6L6 691 aa12.7□□□□□ -0.38
HDAC6-229ENST00000486665 ZFYVE26Q68DK2 2539 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 ASCC3Q8N3C0 2202 aaKnown RBP12.69□□□□□ -0.38
HDAC6-229ENST00000486665 ADAMTS9Q9P2N4 1935 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 UQCRHLA0A096LP55 91 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 FADS2P1A8MWK0 482 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 C1QTNF9BB2RNN3 333 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 RIPK2O43353 540 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PIAS1O75925 651 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 C1QAP02745 245 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 PCCBP05166 539 aa12.69□□□□□ -0.38
HDAC6-229ENST00000486665 UQCRHP07919 91 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms