RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ARHGEF26Q96DR7 871 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 ZBTB10Q96DT7 871 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 FUZQ9BT04 418 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 IFIH1Q9BYX4 1025 aaKnown RBP3.63□□□□□ -1.83
GCFC2-209ENST00000486016 RIC8AQ9NPQ8 531 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 C2orf42Q9NWW7 574 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 GPR52Q9Y2T5 361 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 RNF215Q9Y6U7 377 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 A0A1W2PP11 408 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 EIF3DO15371 548 aaKnown RBP eCLIP3.62□□□□□ -1.83
GCFC2-209ENST00000486016 EGFP01133 1207 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 IGLV1-44P01699 117 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 COX7A2P14406 83 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 CLDN20P56880 219 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 USP41Q3LFD5 358 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 SLC9B1Q4ZJI4 515 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 ZC2HC1CQ53FD0 456 aaPredicted RBP3.62□□□□□ -1.83
GCFC2-209ENST00000486016 ANO5Q75V66 913 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 SPATA5Q8NB90 893 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 STAMBPL1Q96FJ0 436 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 SENP5Q96HI0 755 aaPredicted RBP3.62□□□□□ -1.83
GCFC2-209ENST00000486016 KLHL15Q96M94 604 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 UPF2Q9HAU5 1272 aaKnown RBP3.62□□□□□ -1.83
GCFC2-209ENST00000486016 ACSS1Q9NUB1 689 aaPredicted RBP3.62□□□□□ -1.83
GCFC2-209ENST00000486016 ACAD8Q9UKU7 415 aa3.62□□□□□ -1.83
GCFC2-209ENST00000486016 VCYO14598 125 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 NBNO60934 754 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 ZNF821O75541 412 aaPredicted RBP3.61□□□□□ -1.83
GCFC2-209ENST00000486016 ZNF23P17027 643 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 KRT9P35527 623 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 IRX1P78414 480 aaPredicted RBP3.61□□□□□ -1.83
GCFC2-209ENST00000486016 ALG11Q2TAA5 492 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 PRICKLE4Q2TBC4 344 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 C6orf141Q5SZD1 244 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 SIGIRRQ6IA17 410 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 RBMS3Q6XE24 437 aaKnown RBP3.61□□□□□ -1.83
GCFC2-209ENST00000486016 GTSCR1Q86UQ5 136 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 WDR20Q8TBZ3 569 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 APBB2Q92870 758 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 ZSCAN31Q96LW9 406 aaPredicted RBP3.61□□□□□ -1.83
GCFC2-209ENST00000486016 MPHOSPH8Q99549 860 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 CDK19Q9BWU1 502 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 ERVMER34-1Q9H9K5 563 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 BRF2Q9HAW0 419 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 DISP3Q9P2K9 1392 aa3.61□□□□□ -1.83
GCFC2-209ENST00000486016 TEX13CA0A0J9YWL9 993 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 FAM90A26D6RGX4 464 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 SEC31AO94979 1220 aaKnown RBP3.6□□□□□ -1.83
GCFC2-209ENST00000486016 TSHBP01222 138 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 UGT1A1P22309 533 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 CDAP32320 146 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 AHRP35869 848 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 CLK1P49759 484 aaKnown RBP3.6□□□□□ -1.83
GCFC2-209ENST00000486016 GNAQP50148 359 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 RHBDL3P58872 404 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 SPOCK1Q08629 439 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 GRIK2Q13002 908 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 CAMK1Q14012 370 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 FGFBP1Q14512 234 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 LDHAL6AQ6ZMR3 332 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 RRM2BQ7LG56 351 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 MAP7D3Q8IWC1 876 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 ADSSL1Q8N142 457 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 RBM15BQ8NDT2 890 aaKnown RBP3.6□□□□□ -1.83
GCFC2-209ENST00000486016 NOC3LQ8WTT2 800 aaKnown RBP3.6□□□□□ -1.83
GCFC2-209ENST00000486016 TCP11L1Q9NUJ3 509 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 C2CD2Q9Y426 696 aa3.6□□□□□ -1.83
GCFC2-209ENST00000486016 A0A1W2PPI3 338 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 USP17L23D6RBM5 183 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 NCAM2O15394 837 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 CIDEAO60543 219 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 TCEA3O75764 348 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 WISP2O76076 250 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 CSF2RAP15509 400 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 AZU1P20160 251 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 UBA7P41226 1012 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 DSCR10P59022 87 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 KIR2DS3Q14952 304 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 COL28A1Q2UY09 1125 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 BSPRYQ5W0U4 402 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 LCN10Q6JVE6 187 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 PIWIL4Q7Z3Z4 852 aaKnown RBP3.59□□□□□ -1.83
GCFC2-209ENST00000486016 ZNF473Q8WTR7 871 aaKnown RBP3.59□□□□□ -1.83
GCFC2-209ENST00000486016 SLC44A1Q8WWI5 657 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 ACOX2Q99424 681 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 DCTN5Q9BTE1 182 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 PPP1R14DQ9NXH3 145 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 MAP3K20Q9NYL2 800 aaKnown RBP3.59□□□□□ -1.83
GCFC2-209ENST00000486016 MPP6Q9NZW5 540 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 MARCH4Q9P2E8 410 aaPredicted RBP3.59□□□□□ -1.83
GCFC2-209ENST00000486016 FBXL2Q9UKC9 423 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 KLHL20Q9Y2M5 609 aa3.59□□□□□ -1.83
GCFC2-209ENST00000486016 TNPO2O14787 897 aaKnown RBP3.58□□□□□ -1.84
GCFC2-209ENST00000486016 KCNN4O15554 427 aa3.58□□□□□ -1.84
GCFC2-209ENST00000486016 NR2C2P49116 596 aa3.58□□□□□ -1.84
GCFC2-209ENST00000486016 AMPHP49418 695 aa3.58□□□□□ -1.84
GCFC2-209ENST00000486016 COG7P83436 770 aa3.58□□□□□ -1.84
GCFC2-209ENST00000486016 PLIN5Q00G26 463 aa3.58□□□□□ -1.84
GCFC2-209ENST00000486016 KRTCAP3Q53RY4 240 aa3.58□□□□□ -1.84
GCFC2-209ENST00000486016 DCST1Q5T197 706 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms