RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SERPINB11Q96P15 392 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 HAPLN3Q96S86 360 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 FEM1AQ9BSK4 669 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 DDA1Q9BW61 102 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 PANK2Q9BZ23 570 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 EDEM3Q9BZQ6 932 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 TNMDQ9H2S6 317 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 CISHQ9NSE2 258 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 NTMQ9P121 344 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 ERRFI1Q9UJM3 462 aaPredicted RBP6.65□□□□□ -1.34
SMC4-217ENST00000485867 SRPRBQ9Y5M8 271 aaKnown RBP6.65□□□□□ -1.34
SMC4-217ENST00000485867 AKAP9Q99996 3911 aa6.65□□□□□ -1.34
SMC4-217ENST00000485867 CSMD2Q7Z408 3487 aa6.65□□□□□ -1.35
SMC4-217ENST00000485867 ANKHD1Q8IWZ3 2542 aaKnown RBP6.65□□□□□ -1.35
SMC4-217ENST00000485867 LOC101059948A0A1B0GTJ6 334 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 F5H5T6 163 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 K7ERQ8 282 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 KCNH1O95259 989 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 CPNE6O95741 557 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 APOEP02649 317 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 FYNP06241 537 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 SETSIPP0DME0 302 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 RRM1P23921 792 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 BLKP51451 505 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 HK3P52790 923 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 YPEL5P62699 121 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 MC1RQ01726 317 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 KNOP1Q1ED39 458 aaKnown RBP6.64□□□□□ -1.35
SMC4-217ENST00000485867 ALG11Q2TAA5 492 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 CNNM4Q6P4Q7 775 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 PARS2Q7L3T8 475 aaKnown RBP6.64□□□□□ -1.35
SMC4-217ENST00000485867 TIPARPQ7Z3E1 657 aaKnown RBP6.64□□□□□ -1.35
SMC4-217ENST00000485867 BRAPQ7Z569 592 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 TAC4Q86UU9 113 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 VPS36Q86VN1 386 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 GKN2Q86XP6 184 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 SFTPA2Q8IWL1 248 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 UNC5BQ8IZJ1 945 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 TTC39CQ8N584 583 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 PDILTQ8N807 584 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 RCBTB1Q8NDN9 531 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 BVESQ8NE79 360 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 GOLGA5Q8TBA6 731 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 UBA3Q8TBC4 463 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 CLEC4CQ8WTT0 213 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 STARD8Q92502 1023 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 KIAA1143Q96AT1 154 aaPredicted RBP6.64□□□□□ -1.35
SMC4-217ENST00000485867 CENPTQ96BT3 561 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 SEC16BQ96JE7 1060 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 BTN2A3PQ96KV6 586 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 PPP1R9BQ96SB3 815 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 PRMT1Q99873 361 aaKnown RBP6.64□□□□□ -1.35
SMC4-217ENST00000485867 GORASP1Q9BQQ3 440 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 NUDT22Q9BRQ3 303 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 EFHD1Q9BUP0 239 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 RDH14Q9HBH5 336 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 HESX1Q9UBX0 185 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 IL36AQ9UHA7 158 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 VPS28Q9UK41 221 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 PILRAQ9UKJ1 303 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 ITM2BQ9Y287 266 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 CLIC4Q9Y696 253 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 ZGRF1Q86YA3 2104 aa6.64□□□□□ -1.35
SMC4-217ENST00000485867 IGHV5-10-1A0A0J9YXX1 117 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 TCP11X1B4DZS4 312 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 O00370 1275 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 HNRNPRO43390 633 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 B4GAT1O43505 415 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 SMAD6O43541 496 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 TSPAN6O43657 245 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 SNAP91O60641 907 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 RFPL1O75677 317 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 SORBS2O94875 1100 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 RASGRP1O95267 797 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 TRIM49P0CI25 452 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 TRIM49CP0CI26 452 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 CTSEP14091 401 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 TCN2P20062 427 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 GCLMP48507 274 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 RGS7P49802 495 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 ZNF143P52747 638 aaPredicted RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 COPB1P53618 953 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 NUCB2P80303 420 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 B4GALNT1Q00973 533 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 PPP3CAQ08209 521 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 ARHGEF7Q14155 803 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 HLTFQ14527 1009 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMC4-217ENST00000485867 MDC1Q14676 2089 aaKnown RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 C14orf28Q4W4Y0 310 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 PRR30Q53SZ7 412 aaPredicted RBP6.63□□□□□ -1.35
SMC4-217ENST00000485867 RABGAP1LQ5R372 815 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 C22orf39Q6P5X5 142 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 POMZP3Q6PJE2 187 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 DPY19L3Q6ZPD9 716 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 UNC13DQ70J99 1090 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 PIM3Q86V86 326 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 NLGN4XQ8N0W4 816 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 ATP11CQ8NB49 1132 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 CCDC112Q8NEF3 446 aa6.63□□□□□ -1.35
SMC4-217ENST00000485867 NLGN4YQ8NFZ3 816 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms