RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 COX14Q96I36 57 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ZNF830Q96NB3 372 aaPredicted RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 FCRL5Q96RD9 977 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 CDC6Q99741 560 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 APOOQ9BUR5 198 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 BOCQ9BWV1 1114 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 GTPBP2Q9BX10 602 aaKnown RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 OSBPL8Q9BZF1 889 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 CLPBQ9H078 707 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 GRPEL1Q9HAV7 217 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 GLOD4Q9HC38 313 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 MAGEE1Q9HCI5 957 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 FGF22Q9HCT0 170 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 AASDHPPTQ9NRN7 309 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 KLK13Q9UKR3 277 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 AMFRQ9UKV5 643 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ATXN7L1Q9ULK2 861 aaPredicted RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 CNOT6Q9ULM6 557 aaKnown RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 PYCARDQ9ULZ3 195 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.71□□□□□ -1.5
CUX1-208ENST00000485792 HEY1Q9Y5J3 304 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 CACNA1GO43497 2377 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 MACROD2A1Z1Q3 448 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 C5orf60A6NFR6 353 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TMEM202A6NGA9 273 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 AGAP14A8MT82 685 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 FADS2P1A8MWK0 482 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 LMO7DNF2Z398 122 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TNFSF14O43557 240 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 IPO7O95373 1038 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 EML2O95834 649 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CPP00450 1065 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CEACAM5P06731 702 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 FTH1P19P0C7X4 201 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 PIRTP0C851 137 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CYP2A6P11509 494 aaPredicted RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 CDK4P11802 303 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CKMT1AP12532 417 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TNNT1P13805 278 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TSHRP16473 764 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CTPS1P17812 591 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 SSR1P43307 286 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 ACADVLP49748 655 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 IDH3AP50213 366 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 HK3P52790 923 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 ATXN3P54252 364 aaPredicted RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 C21orf59P57076 290 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 DCDC1P59894 354 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 HNRNPKP61978 463 aaKnown RBP eCLIP5.7□□□□□ -1.5
CUX1-208ENST00000485792 OTUD4Q01804 1114 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 TNP2Q05952 138 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CDK18Q07002 472 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 DNAJC3Q13217 504 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 ILKQ13418 452 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 GALNT3Q14435 633 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 INPP5AQ14642 412 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 PTPRCAPQ14761 206 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 NFATC4Q14934 902 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TCEA2Q15560 299 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 OASLQ15646 514 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 UAP1L1Q3KQV9 507 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 HENMT1Q5T8I9 393 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 ARMC12Q5T9G4 340 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 KCTD11Q693B1 232 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 DENND5AQ6IQ26 1287 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 PNCKQ6P2M8 343 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 DRICH1Q6PGQ1 229 aaPredicted RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 OGFOD3Q6PK18 319 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 LVRNQ6Q4G3 990 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 ADAMTSL4Q6UY14 1074 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 Q6ZVL8 140 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TMPRSS7Q7RTY8 843 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TMPRSS9Q7Z410 1059 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TMC3Q7Z5M5 1100 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TRIM74Q86UV6 250 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 ZNF354CQ86Y25 554 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 NRROSQ86YC3 692 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TREML1Q86YW5 311 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 RFX6Q8HWS3 928 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 REXO1L1PQ8IX06 675 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 NRSN1Q8IZ57 195 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 AGGF1Q8N302 714 aaeCLIP5.7□□□□□ -1.5
CUX1-208ENST00000485792 C17orf53Q8N3J3 647 aaPredicted RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 RYBPQ8N488 228 aaPredicted RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 CCNYQ8ND76 341 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 ACTL9Q8TC94 416 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CXorf40AQ8TE69 158 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 NSMCE1Q8WV22 266 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TFB1MQ8WVM0 346 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 HTR3CQ8WXA8 447 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 OR1E3Q8WZA6 343 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 P3H4Q92791 437 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 GATA6Q92908 595 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 RBM15Q96T37 977 aaKnown RBP eCLIP5.7□□□□□ -1.5
CUX1-208ENST00000485792 LRRC61Q9BV99 259 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 C1QTNF7Q9BXJ2 289 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 HEMGNQ9BXL5 484 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TLR10Q9BXR5 811 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 MAK16Q9BXY0 300 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms