RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 GOLGA6CA6NDK9 693 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 GOLGA6BA6NDN3 693 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 OR5K4A6NMS3 321 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 KIR2DS3K7RE56 304 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 ATMINO43313 823 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-227ENST00000485102 EML2O95834 649 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 DLGAP3O95886 979 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 SERPINC1P01008 464 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 ANKRD34CP0C6C1 535 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 GOLGA6DP0CG33 693 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 MYBL1P10243 752 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 GP1BBP13224 206 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 SLC2A4P14672 509 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 CLCNKAP51800 687 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 MAXP61244 160 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 RPL26P61254 145 aaKnown RBP12.91□□□□□ -0.34
HDAC6-227ENST00000485102 HHEXQ03014 270 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 CDC20Q12834 499 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 KIR2DS5Q14953 304 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 NCAPHQ15003 741 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 IQCB1Q15051 598 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 PTPRRQ15256 657 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 RFLNAQ6ZTI6 216 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 ATPAF2Q8N5M1 289 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 ABHD17AQ96GS6 310 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 HERPUD2Q9BSE4 406 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-227ENST00000485102 STN1Q9H668 368 aaKnown RBP12.91□□□□□ -0.34
HDAC6-227ENST00000485102 UCK1Q9HA47 277 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 CBX8Q9HC52 389 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 GOLGA6AQ9NYA3 693 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 RCOR3Q9P2K3 495 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-227ENST00000485102 CNOT6Q9ULM6 557 aaKnown RBP12.91□□□□□ -0.34
HDAC6-227ENST00000485102 RPL26L1Q9UNX3 145 aaKnown RBP12.91□□□□□ -0.34
HDAC6-227ENST00000485102 NBPF19A0A087WUL8 3843 aa12.91□□□□□ -0.34
HDAC6-227ENST00000485102 ICE1Q9Y2F5 2266 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 RGSL1A5PLK6 1076 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 STK17BO94768 372 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 MAP3K6O95382 1288 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 RECKO95980 971 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 PRLP01236 227 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 RARAP10276 462 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 CTPS1P17812 591 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 PIGHQ14442 188 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-227ENST00000485102 LYSMD3Q7Z3D4 306 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 ZNF571Q7Z3V5 609 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-227ENST00000485102 SLC9B2Q86UD5 537 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 ESX1Q8N693 406 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 NIPA2Q8N8Q9 360 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 FAM71BQ8TC56 605 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 MAML1Q92585 1016 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 AGAP2Q99490 1192 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 RIOK2Q9BVS4 552 aaKnown RBP12.9□□□□□ -0.34
HDAC6-227ENST00000485102 POLR1EQ9GZS1 481 aaKnown RBP12.9□□□□□ -0.34
HDAC6-227ENST00000485102 ISCUQ9H1K1 167 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 HAUS4Q9H6D7 363 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 TBC1D29Q9UFV1 150 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 CD84Q9UIB8 345 aa12.9□□□□□ -0.34
HDAC6-227ENST00000485102 MN1Q10571 1320 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 TRBV23OR9-2A0A075B6M9 112 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 LILRA5A6NI73 299 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 DDX3XO00571 662 aaKnown RBP eCLIP12.89□□□□□ -0.351e-8■■■■□ 23.1
HDAC6-227ENST00000485102 POLR1CO15160 346 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 TOX3O15405 576 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 C9P02748 559 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 F3P13726 295 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 IL4RP24394 825 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 OAS2P29728 719 aaKnown RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 CD97P48960 835 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 IHHQ14623 411 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 IGFBP7Q16270 282 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 HENMT1Q5T8I9 393 aaKnown RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 TRIM74Q86UV6 250 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 ZNF761Q86XN6 746 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 PLXDC1Q8IUK5 500 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 NCSTNQ92542 709 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 TSGA13Q96PP4 275 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 WDR24Q96S15 920 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 PCDH18Q9HCL0 1135 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 APMAPQ9HDC9 416 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 NT5MQ9NPB1 228 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 SIDT1Q9NXL6 827 aaKnown RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 ZNHIT2Q9UHR6 403 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 KCTD3Q9Y597 815 aa12.89□□□□□ -0.35
HDAC6-227ENST00000485102 PCYT1BQ9Y5K3 369 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-227ENST00000485102 A0A0U1RQS6 177 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 LRRC53A6NM62 1247 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 A8MU76 341 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 GPR89AB7ZAQ6 455 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 MATN3O15232 486 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 NUAK1O60285 661 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 ASMTLO95671 621 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 GPR89BP0CG08 455 aa12.88□□□□□ -0.35
HDAC6-227ENST00000485102 TCF4P15884 667 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms