RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 BRD8Q9H0E9 1235 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 TSPY26PQ9H489 355 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 DDX56Q9NY93 547 aaKnown RBP9.36□□□□□ -0.91
NUP50-215ENST00000484186 SEPT10Q9P0V9 454 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 VPS18Q9P253 973 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 INTUQ9ULD6 942 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 OAS3Q9Y6K5 1087 aaKnown RBP9.36□□□□□ -0.91
NUP50-215ENST00000484186 BPTFQ12830 3046 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 IGHV1OR21-1A0A087WYE8 117 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 PRAMEF33A0A0G2JMD5 474 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 FADS2P1A8MWK0 482 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 C9orf172C9J069 976 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 AKR1B15C9JRZ8 316 aaPredicted RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 HGSO14964 777 aaPredicted RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 PPP1R12AO14974 1030 aaPredicted RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 PRAMEF10O60809 474 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 KRT1P04264 644 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 ATP1A1P05023 1023 aaKnown RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 LIPCP11150 499 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 CCL4P13236 92 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 TNNT1P13805 278 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 CD82P27701 267 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 FASLGP48023 281 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 LIMK2P53671 638 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 CDK18Q07002 472 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 TRA2AQ13595 282 aaKnown RBP eCLIP9.35□□□□□ -0.91
NUP50-215ENST00000484186 GALNT3Q14435 633 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 TCEAL1Q15170 157 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 TGIF1Q15583 401 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 ODF2Q5BJF6 829 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 FAM182AQ5T1J6 154 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 TMEM164Q5U3C3 297 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 KIAA1614Q5VZ46 1190 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 BZW1Q7L1Q6 419 aaKnown RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 CHST15Q7LFX5 561 aaPredicted RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 KDELC2Q7Z4H8 507 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 ZFAND4Q86XD8 727 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 RFX6Q8HWS3 928 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 CNGA4Q8IV77 575 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 ZNF843Q8N446 348 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 RCBTB1Q8NDN9 531 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 OR4D9Q8NGE8 314 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 SLC37A2Q8TED4 501 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 IMP4Q96G21 291 aaKnown RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 CCDC74BQ96LY2 380 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 AGAP3Q96P47 875 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 OLFM3Q96PB7 478 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 TRIB3Q96RU7 358 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 SLC38A3Q99624 504 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 ANP32EQ9BTT0 268 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 CEP41Q9BYV8 373 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 SLC25A51Q9H1U9 297 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 RMI1Q9H9A7 625 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 ZFYVE1Q9HBF4 777 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 MAGEE1Q9HCI5 957 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 KCNK4Q9NYG8 393 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 PRKAB1Q9Y478 270 aa9.35□□□□□ -0.91
NUP50-215ENST00000484186 PCYT1BQ9Y5K3 369 aaPredicted RBP9.35□□□□□ -0.91
NUP50-215ENST00000484186 NUAK1O60285 661 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 EML2O95834 649 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 COMTP21964 271 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 DYNLT1P63172 113 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 GPLD1P80108 840 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 SLC14A2Q15849 920 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 TEX44Q53QW1 395 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.34□□□□□ -0.91
NUP50-215ENST00000484186 TMEM71Q6P5X7 295 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 IYDQ6PHW0 289 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 MFSD7Q6UXD7 560 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 B4GALNT4Q76KP1 1039 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 LYSMD3Q7Z3D4 306 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 ZNF605Q86T29 641 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 RNF214Q8ND24 703 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 GPR26Q8NDV2 337 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 TADA1Q96BN2 335 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 EID2BQ96D98 161 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 AHCYL2Q96HN2 611 aaKnown RBP9.34□□□□□ -0.91
NUP50-215ENST00000484186 TAAR9Q96RI9 348 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 SPATA16Q9BXB7 569 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 CARD9Q9H257 536 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 GLOD4Q9HC38 313 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 SARS2Q9NP81 518 aaKnown RBP9.34□□□□□ -0.91
NUP50-215ENST00000484186 RAD18Q9NS91 495 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 FOXJ2Q9P0K8 574 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 TBC1D29Q9UFV1 150 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 SHOC2Q9UQ13 582 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 HYOU1Q9Y4L1 999 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 PCDHB11Q9Y5F2 797 aa9.34□□□□□ -0.91
NUP50-215ENST00000484186 SCN8AQ9UQD0 1980 aa9.33□□□□□ -0.92
NUP50-215ENST00000484186 A0A0A6YYK5 440 aaPredicted RBP9.33□□□□□ -0.92
NUP50-215ENST00000484186 OR5K4A6NMS3 321 aa9.33□□□□□ -0.92
NUP50-215ENST00000484186 GRID2O43424 1007 aa9.33□□□□□ -0.92
NUP50-215ENST00000484186 SPOPO43791 374 aa9.33□□□□□ -0.92
NUP50-215ENST00000484186 SNX2O60749 519 aa9.33□□□□□ -0.92
NUP50-215ENST00000484186 SLC25A14O95258 325 aaPredicted RBP9.33□□□□□ -0.92
NUP50-215ENST00000484186 MT-CYBP00156 380 aaPredicted RBP9.33□□□□□ -0.92
NUP50-215ENST00000484186 PIRTP0C851 137 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms