RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TEAD1P28347 426 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 VIPR1P32241 457 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 SRP54P61011 504 aaKnown RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 DSC2Q02487 901 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ADCY2Q08462 1091 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 RALGDSQ12967 914 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ZBTB17Q13105 803 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 KLF1Q13351 362 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 LRRC14Q15048 493 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 RPS6KA1Q15418 735 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 TBR1Q16650 682 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ALG11Q2TAA5 492 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 SEL1L2Q5TEA6 688 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ITPRIPL1Q6GPH6 555 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 LVRNQ6Q4G3 990 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 XKR5Q6UX68 686 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 LIPIQ6XZB0 460 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 CBARPQ8N350 705 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ACTL9Q8TC94 416 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 PDCD6IPQ8WUM4 868 aaKnown RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 JPH3Q8WXH2 748 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-213ENST00000484112 USP7Q93009 1102 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 LRRC45Q96CN5 670 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 HEMGNQ9BXL5 484 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 GLOD4Q9HC38 313 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 PCDH9Q9HC56 1237 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 LZTFL1Q9NQ48 299 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 FOXJ2Q9P0K8 574 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 KLQ9UEF7 1012 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 ZKSCAN5Q9Y2L8 839 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 TTLL3Q9Y4R7 772 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 OR1A2Q9Y585 309 aa9.97□□□□□ -0.81
CPSF4-213ENST00000484112 KALRNO60229 2985 aa9.96□□□□□ -0.81
CPSF4-213ENST00000484112 ANKRD36A6QL64 1941 aa9.96□□□□□ -0.81
CPSF4-213ENST00000484112 A0A0U1RQJ8 604 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 ANKRD66B4E2M5 251 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 PDE2AO00408 941 aaPredicted RBP9.96□□□□□ -0.82
CPSF4-213ENST00000484112 NVLO15381 856 aaKnown RBP9.96□□□□□ -0.82
CPSF4-213ENST00000484112 SUV39H1O43463 412 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 HEXIM1O94992 359 aaKnown RBP9.96□□□□□ -0.82
CPSF4-213ENST00000484112 TNFP01375 233 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 PCCBP05166 539 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 MMP2P08253 660 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 RBP3P10745 1247 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 SFTPCP11686 197 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 CCKBRP32239 447 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 ETV5P41161 510 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 CD86P42081 329 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 TNNT3P45378 269 aaPredicted RBP9.96□□□□□ -0.82
CPSF4-213ENST00000484112 EPHB1P54762 984 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 OTUD4Q01804 1114 aaKnown RBP9.96□□□□□ -0.82
CPSF4-213ENST00000484112 DPTQ07507 201 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 NIPAL4Q0D2K0 466 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 WASHC5Q12768 1159 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 MPP3Q13368 585 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 MTM1Q13496 603 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 ARHGEF7Q14155 803 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 INPP5AQ14642 412 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 NFATC4Q14934 902 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 WSCD2Q2TBF2 565 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 PHF19Q5T6S3 580 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 CCDC70Q6NSX1 233 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 ZNF765Q7L2R6 523 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 TAF8Q7Z7C8 310 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 ZC3H18Q86VM9 953 aaKnown RBP9.96□□□□□ -0.82
CPSF4-213ENST00000484112 CCNJLQ8IV13 435 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 NRSN1Q8IZ57 195 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 OR6C4Q8NGE1 309 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 MAIP1Q8WWC4 291 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 NSMCE3Q96MG7 304 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 AGAP3Q96P47 875 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 FCRL5Q96RD9 977 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 CMKLR1Q99788 373 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 APOOQ9BUR5 198 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 CDH19Q9H159 772 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 RAD18Q9NS91 495 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 SAE1Q9UBE0 346 aaPredicted RBP9.96□□□□□ -0.82
CPSF4-213ENST00000484112 B4GALT6Q9UBX8 382 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 FAM153AQ9UHL3 310 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.82
CPSF4-213ENST00000484112 MYO18BQ8IUG5 2567 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 TTC24A2A3L6 582 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 H7C0C1 242 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 PPFIA2O75334 1257 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 ANXA9O76027 345 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 RECQL5O94762 991 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 PRLP01236 227 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 PDHA1P08559 390 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 WT1P19544 449 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 KELP23276 732 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 STIP1P31948 543 aaKnown RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 TRIM23P36406 574 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 ATP5OP48047 213 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 EIF3EP60228 445 aaKnown RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 CDK18Q07002 472 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 SRSF1Q07955 248 aaKnown RBP eCLIP9.95□□□□□ -0.822e-6■■■■□ 23.2
CPSF4-213ENST00000484112 KCTD16Q68DU8 428 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 ZNF574Q6ZN55 896 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 PID1Q7Z2X4 250 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 PTRH1Q86Y79 214 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms