RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 IPMKQ8NFU5 416 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 HERPUD2Q9BSE4 406 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 TSGA10Q9BZW7 698 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 TRABDQ9H4I3 376 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 RMI1Q9H9A7 625 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 SPATS2LQ9NUQ6 558 aaKnown RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 HACD3Q9P035 362 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 LRIT1Q9P2V4 623 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 NFKBIL1Q9UBC1 381 aaPredicted RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 TRIM10Q9UDY6 481 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 ZNHIT2Q9UHR6 403 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 APPL1Q9UKG1 709 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 CNOT6Q9ULM6 557 aaKnown RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 CACNA1GO43497 2377 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 FADS2P1A8MWK0 482 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 TMX2-CTNND1H3BSU7 103 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 NTN3O00634 580 aaPredicted RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 KCNN4O15554 427 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 ZW10O43264 779 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 NUDT21O43809 227 aaKnown RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 BRINP1O60477 761 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 ANXA9O76027 345 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 FTCDO95954 541 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 ATP1A1P05023 1023 aaKnown RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 FGF1P05230 155 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 RPLP0P05388 317 aaKnown RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 HLA-DPA1P20036 260 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 LSSP48449 732 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 GEMP55040 296 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 GABREP78334 506 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 CCL7P80098 99 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 PRPSAP1Q14558 356 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 CFAP47Q6ZTR5 3102 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 CCNJLQ8IV13 435 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 SLC25A41Q8N5S1 370 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 RNF10Q8N5U6 811 aaKnown RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 TRAM1L1Q8N609 369 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 Q8N9G6 341 aaPredicted RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 TTC13Q8NBP0 860 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 GPR26Q8NDV2 337 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 EID2BQ96D98 161 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 OXNAD1Q96HP4 312 aaPredicted RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 MRGPRX2Q96LB1 330 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 FSD1LQ9BXM9 530 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 GBA3Q9H227 469 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 LRRN3Q9H3W5 708 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 C10orf88Q9H8K7 445 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 POLR1BQ9H9Y6 1135 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 RABGEF1Q9UJ41 708 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 OAS3Q9Y6K5 1087 aaKnown RBP13.77□□□□□ -0.21
VARS-225ENST00000482996 RNF215Q9Y6U7 377 aa13.77□□□□□ -0.21
VARS-225ENST00000482996 RHPN2P1A8MT19 583 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 KRT86O43790 486 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 SLC25A14O95258 325 aaPredicted RBP13.76□□□□□ -0.21
VARS-225ENST00000482996 MPOP05164 745 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 BPIP17213 487 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 MAZP56270 477 aaKnown RBP13.76□□□□□ -0.21
VARS-225ENST00000482996 SLC1A5Q15758 541 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 SIRPB2Q5JXA9 342 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 ZDHHC20Q5W0Z9 365 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 AADACL2Q6P093 401 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 PHYKPLQ8IUZ5 450 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 UBE2Q2Q8WVN8 375 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 FGF11Q92914 225 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 ATXN7L3BQ96GX2 97 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 PPP1R2P1Q96PQ5 205 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 STRADBQ9C0K7 418 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 CARD9Q9H257 536 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 PACSIN2Q9UNF0 486 aaPredicted RBP13.76□□□□□ -0.21
VARS-225ENST00000482996 PLEKHM1Q9Y4G2 1056 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 ENTPD2Q9Y5L3 495 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 ADGRG1Q9Y653 693 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 UNC13CQ8NB66 2214 aa13.76□□□□□ -0.21
VARS-225ENST00000482996 CCDC187A0A096LP49 1063 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 GPR89AB7ZAQ6 455 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 D6RAR5 112 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 RRP8O43159 456 aaKnown RBP13.75□□□□□ -0.21
VARS-225ENST00000482996 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 NUAK1O60285 661 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 DNAJC6O75061 913 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ECEL1O95672 775 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 GPR89BP0CG08 455 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 RBMS1P29558 406 aaKnown RBP13.75□□□□□ -0.21
VARS-225ENST00000482996 HMGCLP35914 325 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 CHRNA4P43681 627 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 CCDC173Q0VFZ6 552 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 TBC1D25Q3MII6 688 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 C3orf38Q5JPI3 329 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ANKRD20A2Q5SQ80 823 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ANKRD20A1Q5TYW2 823 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ANKRD20A3Q5VUR7 823 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 LRRC69Q6ZNQ3 347 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 GLT6D1Q7Z4J2 308 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 SPRED1Q7Z699 444 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 C17orf82Q86X59 251 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms