RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 AGO1Q9UL18 857 aaKnown RBP3.81□□□□□ -1.8
GTF3A-207ENST00000482655 PAM16Q9Y3D7 125 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 PCDHGB5Q9Y5G0 923 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 CLDN16Q9Y5I7 305 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 KCNE2Q9Y6J6 123 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 RGPD5Q99666 1765 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 QSER1Q2KHR3 1735 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 TOPAZ1Q8N9V7 1692 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 TULP4Q9NRJ4 1543 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 GOLGB1Q14789 3259 aaKnown RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 OVOS2A0A0G2JMS6 1433 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 OVOS2A0A0J9YW53 1432 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 OVOS2Q6IE36 1432 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ANKARQ7Z5J8 1434 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 RPGRIP1LQ68CZ1 1315 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 MYO1GB0I1T2 1018 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 FAM157AC9JC47 383 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 PTGES3LE9PB15 166 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CHL1O00533 1208 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 TMCC2O75069 709 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 TACC1O75410 805 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF432O94892 652 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 PPP1R3DO95685 299 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ADAP00813 363 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 IGKV3-20P01619 116 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 DAOP14920 347 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF12P17014 697 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CDH2P19022 906 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 GABRB2P47870 512 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 PEX5P50542 639 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ERVFC1-1P60608 527 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 TUBA1BP68363 451 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 OLR1P78380 273 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 PRAMEP78395 509 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CYP4A11Q02928 519 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 POU3F1Q03052 451 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CHAF1BQ13112 559 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CTTNQ14247 550 aaKnown RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CRYMQ14894 314 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 HIST2H2ACQ16777 129 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 KIF19Q2TAC6 998 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 DPCR1Q3MIW9 517 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 DCAF6Q58WW2 860 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 SERTAD4-AS1Q5TG53 156 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 C17orf99Q6UX52 265 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 GPAT4Q86UL3 456 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 TTC39CQ8N584 583 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 PLD5Q8N7P1 536 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 C1orf131Q8NDD1 294 aaKnown RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CADM4Q8NFZ8 388 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 GDPD5Q8WTR4 605 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 PRAM1Q96QH2 718 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 H2AFJQ9BTM1 129 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ITPAQ9BY32 194 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 FTOQ9C0B1 505 aaKnown RBP eCLIP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 SMARCAD1Q9H4L7 1026 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 SH2D4AQ9H788 454 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 KAT14Q9H8E8 782 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 WDR6Q9NNW5 1121 aaKnown RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 SNTG1Q9NSN8 517 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ATP8A2Q9NTI2 1148 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 C20orf141Q9NUB4 165 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 CLIC5Q9NZA1 410 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 TBC1D29Q9UFV1 150 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 TMEM5Q9Y2B1 443 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 ARHGEF28Q8N1W1 1705 aaKnown RBP3.8□□□□□ -1.8
GTF3A-207ENST00000482655 WDR90Q96KV7 1748 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 KIAA1551Q9HCM1 1747 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 NHSQ6T4R5 1651 aa3.8□□□□□ -1.8
GTF3A-207ENST00000482655 BTAF1O14981 1849 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 AKAP12Q02952 1782 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 CPDO75976 1380 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 DHX57Q6P158 1386 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 A0A1B0GUV1 79 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 A0A1B0GVM2 712 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 PABPN1LA6NDY0 278 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 LIPT2A6NK58 231 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 VILLO15195 856 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 SLC25A17O43808 307 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 STARD3NLO95772 234 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 PCNAP12004 261 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 DCTDP32321 178 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 HOXD13P35453 343 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 RPL3P39023 403 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 RGS2P41220 211 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 RAD52P43351 418 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 MXI1P50539 228 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ARSFP54793 590 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 MC1RQ01726 317 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 EEF1A2Q05639 463 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 CALD1Q05682 793 aaKnown RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 TMEM115Q12893 351 aaPredicted RBP3.79□□□□□ -1.8
GTF3A-207ENST00000482655 TRAF3Q13114 568 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 RUNX2Q13950 521 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 PPP2R5BQ15173 497 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 RPE65Q16518 533 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 ME3Q16798 604 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 NCEH1Q6PIU2 408 aa3.79□□□□□ -1.8
GTF3A-207ENST00000482655 CPLX2Q6PUV4 134 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms