RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 VCLP18206 1134 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 EIF2S3P41091 472 aaKnown RBP11.14□□□□□ -0.63
SORT1-204ENST00000482236 VAV2P52735 878 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 MAPK10P53779 464 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 HADHBP55084 474 aaKnown RBP11.14□□□□□ -0.63
SORT1-204ENST00000482236 UCNP55089 124 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 WNT3AP56704 352 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 ERVPABLB-1P60509 514 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 PRKD1Q15139 912 aaPredicted RBP11.14□□□□□ -0.63
SORT1-204ENST00000482236 TCEAL1Q15170 157 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 FAM182AQ5T1J6 154 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 TMEM164Q5U3C3 297 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 CNTD1Q8N815 330 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 CCDC112Q8NEF3 446 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 GPR156Q8NFN8 814 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 OR10G6Q8NH81 332 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 SNIP1Q8TAD8 396 aaKnown RBP11.14□□□□□ -0.63
SORT1-204ENST00000482236 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 KRT35Q92764 455 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 CMKLR1Q99788 373 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 ZCCHC2Q9C0B9 1178 aaKnown RBP11.14□□□□□ -0.63
SORT1-204ENST00000482236 OR2AG1Q9H205 316 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 RMI1Q9H9A7 625 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 BPIFA1Q9NP55 256 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 SPATS2LQ9NUQ6 558 aaKnown RBP11.14□□□□□ -0.63
SORT1-204ENST00000482236 VPS18Q9P253 973 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 AMFRQ9UKV5 643 aa11.14□□□□□ -0.63
SORT1-204ENST00000482236 A0A087WV48 116 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 APOC4-APOC2K7ER74 178 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 KCNN4O15554 427 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 GRID2O43424 1007 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 DUX1O43812 170 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 NOBOXO60393 691 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 ZNF189O75820 626 aaPredicted RBP11.13□□□□□ -0.63
SORT1-204ENST00000482236 ANXA9O76027 345 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 LCA5LO95447 670 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 CPNE6O95741 557 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 PRLP01236 227 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 APOC2P02655 101 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 MMP2P08253 660 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 ITPKBP27987 946 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 AKT1P31749 480 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 CTNNA1P35221 906 aaKnown RBP11.13□□□□□ -0.63
SORT1-204ENST00000482236 GEMP55040 296 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 TMPRSS3P57727 454 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 OR1D5P58170 312 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 EIF3EP60228 445 aaKnown RBP11.13□□□□□ -0.63
SORT1-204ENST00000482236 COPS2P61201 443 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 NFATC2Q13469 925 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 HLTFQ14527 1009 aaKnown RBP eCLIP11.13□□□□□ -0.63
SORT1-204ENST00000482236 SLC14A2Q15849 920 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 SEPT7Q16181 437 aaKnown RBP11.13□□□□□ -0.63
SORT1-204ENST00000482236 SNAP47Q5SQN1 464 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 ARHGEF18Q6ZSZ5 1173 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 USP53Q70EK8 1073 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 B3GNT8Q7Z7M8 397 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 SLC9B2Q86UD5 537 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 TRAPPC5Q8IUR0 188 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 TRAM1L1Q8N609 369 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 TEKT5Q96M29 485 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 LYSMD1Q96S90 227 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 DESI2Q9BSY9 194 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 FICDQ9BVA6 458 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 OSBPL8Q9BZF1 889 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 RDH14Q9HBH5 336 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 MAGEE1Q9HCI5 957 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 HACD3Q9P035 362 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 TRHDEQ9UKU6 1024 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 DNAJC16Q9Y2G8 782 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 PLEKHM1Q9Y4G2 1056 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 PLXNB3Q9ULL4 1909 aa11.13□□□□□ -0.63
SORT1-204ENST00000482236 KMT2BQ9UMN6 2715 aaPredicted RBP11.13□□□□□ -0.63
SORT1-204ENST00000482236 FGF1P05230 155 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 ITGA2BP08514 1039 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 HGFP14210 728 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 PNLIPP16233 465 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 HLA-DPA1P20036 260 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 CSTF2P33240 577 aaKnown RBP eCLIP11.12□□□□□ -0.63
SORT1-204ENST00000482236 SPAM1P38567 509 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
SORT1-204ENST00000482236 HHEXQ03014 270 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 MPP3Q13368 585 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 PYCR3Q53H96 274 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 TAF1BQ53T94 588 aaPredicted RBP11.12□□□□□ -0.63
SORT1-204ENST00000482236 HENMT1Q5T8I9 393 aaKnown RBP11.12□□□□□ -0.63
SORT1-204ENST00000482236 SEL1L2Q5TEA6 688 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 PDPK2PQ6A1A2 396 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 BBS12Q6ZW61 710 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 LRRTM4Q86VH4 590 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 ZNF761Q86XN6 746 aaPredicted RBP11.12□□□□□ -0.63
SORT1-204ENST00000482236 FAM129CQ86XR2 697 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 SFTPA2Q8IWL1 248 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 SPACA3Q8IXA5 215 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 RAVER1Q8IY67 606 aaKnown RBP11.12□□□□□ -0.63
SORT1-204ENST00000482236 ZNF567Q8N184 647 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 AVL9Q8NBF6 648 aa11.12□□□□□ -0.63
SORT1-204ENST00000482236 ACTL9Q8TC94 416 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms