RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RPSAP08865 295 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 C1SP09871 688 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SP9P0CG40 484 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 ETV3P41162 512 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 ELK3P41970 407 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 STC1P52823 247 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 CLNS1AP54105 237 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 PPP2CBP62714 309 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 PPP2CAP67775 309 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TMPRSS15P98073 1019 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SLMAPQ14BN4 828 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SUZ12Q15022 739 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 SKIDA1Q1XH10 827 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 CCNI2Q6ZMN8 369 aaPredicted RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 NLRP9Q7RTR0 991 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TRIM69Q86WT6 500 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 DEFB119Q8N690 84 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 EIF1ADQ8N9N8 165 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 OR13C4Q8NGS5 318 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 STYXQ8WUJ0 223 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 PTCD2Q8WV60 388 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 STAMBPL1Q96FJ0 436 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 EBNA1BP2Q99848 306 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 LRFN3Q9BTN0 628 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 KIFC1Q9BW19 673 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SLC17A9Q9BYT1 436 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SAYSD1Q9NPB0 183 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SOX13Q9UN79 622 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 G3BP2Q9UN86 482 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 CHMP2BQ9UQN3 213 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 FNDC3AQ9Y2H6 1198 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 PLXND1Q9Y4D7 1925 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 E7ESA3 106 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 DLL1O00548 723 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 WNT9AO14904 365 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 EIF3HO15372 352 aaKnown RBP eCLIP11.54□□□□□ -0.56
HPS4-212ENST00000481910 BCKDHBP21953 392 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 NMBRP28336 390 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TNFRSF8P28908 595 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 HADHAP40939 763 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SPINT3P49223 89 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 VSNL1P62760 191 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 CTAG1AP78358 180 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 ELF2Q15723 593 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 MUM1Q2TAK8 710 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 ZNF284Q2VY69 593 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TMEM259Q4ZIN3 620 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 KIAA0895LQ68EN5 471 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 WDR93Q6P2C0 686 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 CEP128Q6ZU80 1094 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TECPR1Q7Z6L1 1165 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 IGDCC3Q8IVU1 814 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
HPS4-212ENST00000481910 FBXO36Q8NEA4 188 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 CADM4Q8NFZ8 388 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 PYROXD1Q8WU10 500 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 NELL1Q92832 810 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 MFSD3Q96ES6 412 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 COQ10AQ96MF6 247 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TRIM56Q9BRZ2 755 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 C1QTNF2Q9BXJ5 285 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 NLE1Q9NVX2 485 aaPredicted RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 ZSCAN32Q9NX65 697 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 ZC3H7BQ9UGR2 993 aaKnown RBP11.54□□□□□ -0.56
HPS4-212ENST00000481910 CD84Q9UIB8 345 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 TEX264Q9Y6I9 313 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 CEP192Q8TEP8 1941 aa11.54□□□□□ -0.56
HPS4-212ENST00000481910 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 FAM237BA0A1B0GVD1 139 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 METTL12A8MUP2 240 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 SLC31A1O15431 190 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 POLBP06746 335 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 BPIP17213 487 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 GM2AP17900 193 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 PGAM1P18669 254 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 ZNF140P52738 457 aaPredicted RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 ARPC4P59998 168 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 CBLBQ13191 982 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 SRSF5Q13243 272 aaKnown RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 FASTKD3Q14CZ7 662 aaKnown RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 ZDHHC20Q5W0Z9 365 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 FBXO38Q6PIJ6 1188 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 RFLNAQ6ZTI6 216 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 CCNJLQ8IV13 435 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 RAVER1Q8IY67 606 aaKnown RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 TMEFF1Q8IYR6 380 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 GPR26Q8NDV2 337 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 PEX13Q92968 403 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 BIRC7Q96CA5 298 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 DNAJC1Q96KC8 554 aaKnown RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 NAT9Q9BTE0 207 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 PCED1AQ9H1Q7 454 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 MRPL46Q9H2W6 279 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms