RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CCDC154A6NI56 674 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 CLDN24A6NM45 220 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FAM25AB3EWG3 89 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FAM25CB3EWG5 89 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FAM25GB3EWG6 89 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 H0Y626 953 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 HAT1O14929 419 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 TBX1O43435 398 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 CNTN5O94779 1100 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 TRIM16O95361 564 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 NPPAP01160 153 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FYNP06241 537 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 CYP2C8P10632 490 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 NCK1P16333 377 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 JUNDP17535 347 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 KCNA5P22460 613 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 IFNA8P32881 189 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 DDOSTP39656 456 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 ST13P50502 369 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 PGGT1BP53609 377 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 TAS2R39P59534 338 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 DEFA1P59665 94 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 DEFA3P59666 94 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 GALK2Q01415 458 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 NFYCQ13952 458 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 ZNF460Q14592 562 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 NFE2Q16621 373 aaPredicted RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 ZNF404Q494X3 552 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 ZC3H12BQ5HYM0 836 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 AGAP9Q5VTM2 703 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 ZNF691Q5VV52 312 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 C14orf80Q86SX3 495 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 PHYKPLQ8IUZ5 450 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 PLD3Q8IV08 490 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 RMDN1Q96DB5 314 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 LGALS12Q96DT0 336 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 C3orf30Q96M34 536 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 NSMCE2Q96MF7 247 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 ASB2Q96Q27 587 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 SEPHS2Q99611 448 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 RBM4BQ9BQ04 359 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 MLPHQ9BV36 600 aaPredicted RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 RBM4Q9BWF3 364 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 DUSP21Q9H596 190 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 TDRD3Q9H7E2 651 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 KAT8Q9H7Z6 458 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 IL37Q9NZH6 218 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 TRHDEQ9UKU6 1024 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FZD10Q9ULW2 581 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FAM92AA1XBS5 289 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 CENPXA8MT69 81 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 G3V2T6 193 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 POLRMTO00411 1230 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 SLC16A6O15403 523 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 MTSS1O43312 755 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 GAS2O43903 313 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 EEDO75530 441 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 RGS20O76081 388 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 ZBTB7AO95365 584 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 APOA1P02647 267 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 MT-ND1P03886 318 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 PRKCBP05771 671 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FGF4P08620 206 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 AGXTP21549 392 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 PKLRP30613 574 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 HTR3AP46098 478 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 ATXN1P54253 815 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 NCS1P62166 190 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 YBX1P67809 324 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 MRPS15P82914 257 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 CDH17Q12864 832 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 TARBP2Q15633 366 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 ZFP69Q49AA0 526 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FAM98BQ52LJ0 330 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 FAAH2Q6GMR7 532 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 STYK1Q6J9G0 422 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 PRR23BQ6ZRT6 265 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 GDPD3Q7L5L3 318 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 DPH6Q7L8W6 267 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 SCUBE3Q8IX30 993 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 CPXCR1Q8N123 301 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 METTL4Q8N3J2 472 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 RNF139Q8WU17 664 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 SLC35F5Q8WV83 523 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 DEPDC7Q96QD5 511 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 NT5C1AQ9BXI3 368 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 NXF2Q9GZY0 626 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 OPTCQ9UBM4 332 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 WBP11Q9Y2W2 641 aaKnown RBP10.6□□□□□ -0.71
SIK3-210ENST00000480468 CNTNAP1P78357 1384 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 ATP6AP2A0A1C7CYW4 349 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 METTL15A6NJ78 407 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 PDZK1P1A8MUH7 402 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 UBFD1O14562 309 aaKnown RBP10.59□□□□□ -0.71
SIK3-210ENST00000480468 VPS4BO75351 444 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 ATP6AP2O75787 350 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 MFN2O95140 757 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms