RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SUPT3HB4E1H0 165 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 PPP6CO00743 305 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 B4GALT3O60512 393 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 SUPT3HO75486 399 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 MLYCDO95822 493 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 EEF1DP29692 281 aaKnown RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 CDK9P50750 372 aaKnown RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 GALNT3Q14435 633 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 TRIM71Q2Q1W2 868 aaKnown RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 PTRH1Q86Y79 214 aaKnown RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 CENPNQ96H22 339 aaPredicted RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 SEPT3Q9UH03 358 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 OAS3Q9Y6K5 1087 aaKnown RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 SOCS2O14508 198 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 SEPT4O43236 478 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 CRCPO75575 148 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 SOAT2O75908 522 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 CHEK2O96017 543 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 PYGLP06737 847 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 SPATA31D3P0C874 917 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 RCAN2Q14206 197 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 VARS2Q5ST30 1063 aaKnown RBP24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 ISLR2Q6UXK2 745 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 SPATA31D4Q6ZUB0 917 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 MIB1Q86YT6 1006 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 SPATA17Q96L03 361 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 NSUN5Q96P11 429 aaKnown RBP24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 A0A1B0GVG6 124 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 TBX18O95935 607 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 NPPAP01160 153 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 UMPSP11172 480 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 CKMT2P17540 419 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 TACR2P21452 398 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 MYF6P23409 242 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 PITRM1Q5JRX3 1037 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 FIBCD1Q8N539 461 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 TRPV3Q8NET8 790 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 AIG1Q9NVV5 245 aa24.49■■□□□ 1.51
SYNGAP1-206ENST00000479510 TTC3P53804 2025 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 GRXCR2A6NFK2 248 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 LRRC14BA6NHZ5 514 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 ECI2O75521 394 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 TRMUO75648 421 aaKnown RBP24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 ASGR1P07306 291 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 UROSP10746 265 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 CES1P23141 567 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 SLC5A2P31639 672 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 BIRC2Q13490 618 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 PTPRCAPQ14761 206 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 TAF1AQ15573 450 aaPredicted RBP24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 PAQR3Q6TCH7 311 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 SLC24A5Q71RS6 500 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 ERI1Q8IV48 349 aaKnown RBP24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 ADGRG5Q8IZF4 528 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 LRCH3Q96II8 777 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 PSKH2Q96QS6 385 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 BRINP2Q9C0B6 783 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 CAAP1Q9H8G2 361 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 CD320Q9NPF0 282 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 MED16Q9Y2X0 877 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 PTGDR2Q9Y5Y4 395 aa24.48■■□□□ 1.51
SYNGAP1-206ENST00000479510 ARPC2O15144 300 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 PFDN6O15212 129 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 EEDO75530 441 aaKnown RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 CYBBP04839 570 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 LINC00032P0C843 101 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 EEFSECP57772 596 aaKnown RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 KCNK10P57789 538 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 TAF10Q12962 218 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 MRPL58Q14197 206 aaKnown RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 EML3Q32P44 896 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 AASDHQ4L235 1098 aaPredicted RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 SETMARQ53H47 684 aaPredicted RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 XKR7Q5GH72 579 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 SPRED1Q7Z699 444 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 RASAL3Q86YV0 1011 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 SPPL2CQ8IUH8 684 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 TMEM125Q96AQ2 219 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 ZFYVE28Q9HCC9 887 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 A0A087WXM4 84 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 TRIM64A6NGJ6 449 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 F5H5T6 163 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 H3BSA7 217 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 NDUFS3O75489 264 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 ESRRBO95718 433 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 FAM189BP81408 668 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 ATP6AP1Q15904 470 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 CTXN3Q4LDR2 81 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 PDCD4Q53EL6 469 aaKnown RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 CLLU1OSQ5K130 101 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 TMTC4Q5T4D3 741 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 NADSYN1Q6IA69 706 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 CIR1Q86X95 450 aaPredicted RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 CBR4Q8N4T8 237 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 PAPD5Q8NDF8 572 aaKnown RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 ADAMTS16Q8TE57 1224 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 GFM2Q969S9 779 aaKnown RBP24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 KCNA7Q96RP8 456 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 IL1RL2Q9HB29 575 aa24.47■■□□□ 1.51
SYNGAP1-206ENST00000479510 AURKCQ9UQB9 309 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms