RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 AGAP4Q96P64 663 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 DEPDC7Q96QD5 511 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 IL12RB2Q99665 862 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 ADAM2Q99965 735 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 NAT9Q9BTE0 207 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 SLC25A23Q9BV35 468 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 ING2Q9H160 280 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 LRRC40Q9H9A6 602 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 TBX20Q9UMR3 447 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 SPEF1Q9Y4P9 236 aa13.12□□□□□ -0.31
CNKSR3-204ENST00000479339 KCNK2O95069 426 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 DLGAP3O95886 979 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 DARSP14868 501 aaKnown RBP13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 TFEBP19484 476 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 ATP6V1B2P21281 511 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 TGM2P21980 687 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 ARL1P40616 181 aaPredicted RBP13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 ZNF132P52740 706 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 TSPY1Q01534 308 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 RALGDSQ12967 914 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 POLD3Q15054 466 aaPredicted RBP13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 MAPK11Q15759 364 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 PAGE2BQ5JRK9 111 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 LIPMQ5VYY2 423 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 LCN8Q6JVE9 175 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 NEK5Q6P3R8 708 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 GK5Q6ZS86 529 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 SLC24A5Q71RS6 500 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 SNX29P2Q8IUI4 249 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 PELI3Q8N2H9 469 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 MYRFLQ96LU7 910 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 CPNE1Q99829 537 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 CHID1Q9BWS9 393 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 LMAN2LQ9H0V9 348 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 SNX15Q9NRS6 342 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 SYBUQ9NX95 663 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 ZNF639Q9UID6 485 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 MRPL42Q9Y6G3 142 aaKnown RBP13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 RALGAPA2Q2PPJ7 1873 aa13.11□□□□□ -0.31
CNKSR3-204ENST00000479339 PRRC2BQ5JSZ5 2229 aaKnown RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 SLC16A4O15374 487 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 MAFO75444 373 aaPredicted RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 GPC4O75487 556 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 CLIC3O95833 236 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 CRHBPP24387 322 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 HTR1BP28222 390 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 NRLP54845 237 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 GALK2Q01415 458 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 TIGD5Q53EQ6 642 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 CHST15Q7LFX5 561 aaPredicted RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 OR13J1Q8NGT2 312 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 ADAM32Q8TC27 787 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 HTRA1Q92743 480 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 HLA-CQ95604 372 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 UBXN10Q96LJ8 280 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 C11orf84Q9BUA3 381 aaPredicted RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 MKRN2Q9H000 416 aaKnown RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 PAK1IP1Q9NWT1 392 aaPredicted RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 ARHGAP28Q9P2N2 729 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 AURKCQ9UQB9 309 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 GPSM3Q9Y4H4 160 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 SNX5Q9Y5X3 404 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 EVPLQ92817 2033 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 CENPXA8MT69 81 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 MRASO14807 208 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 ZW10O43264 779 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 ENDOD1O94919 500 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 PIGNO95427 931 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 SEC24AO95486 1093 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 PGAM1P18669 254 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 TFE3P19532 575 aaPredicted RBP13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 TFF2Q03403 129 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 SMU1Q2TAY7 513 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 ZFP69Q49AA0 526 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 CLEC14AQ86T13 490 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 C4orf19Q8IY42 314 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 CLYBLQ8N0X4 340 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 POC5Q8NA72 575 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 TRPV3Q8NET8 790 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 FIG4Q92562 907 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 PEX13Q92968 403 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 MARK4Q96L34 752 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 CALN1Q9BXU9 219 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 POLE4Q9NR33 117 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 GIMAP4Q9NUV9 329 aa13.1□□□□□ -0.31
CNKSR3-204ENST00000479339 TRANK1O15050 2925 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 TEX51A0A1B0GUA7 166 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 SNTNA6NMZ2 147 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 AP3B1O00203 1094 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms