RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ADM5C9JUS6 153 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 ZW10O43264 779 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 MAN1A2O60476 641 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 CFL1P23528 166 aaKnown RBP11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 ARNTP27540 789 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 OPRL1P41146 370 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 LILRA4P59901 499 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 YBX1P67809 324 aaKnown RBP11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 PMS2P3Q13401 168 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 HERC3Q15034 1050 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 DCAF4L1Q3SXM0 396 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 UGT3A1Q6NUS8 523 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 TTC33Q6PID6 262 aaPredicted RBP11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 PIWIL4Q7Z3Z4 852 aaKnown RBP11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 ZNF354CQ86Y25 554 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 SPPL2CQ8IUH8 684 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 CYGBQ8WWM9 190 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 C16orf70Q9BSU1 422 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 COLEC11Q9BWP8 271 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 FSD1LQ9BXM9 530 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 CFL2Q9Y281 166 aa11.02□□□□□ -0.64
LRRFIP1-211ENST00000478958 NR5A2O00482 541 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PRLP01236 227 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 KRT8P05787 483 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SNRPB2P08579 225 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 ATP6V1B2P21281 511 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 CCNCP24863 283 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 TAGLNQ01995 201 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 RFTN1Q14699 578 aaPredicted RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 RAB39AQ14964 217 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SNAP47Q5SQN1 464 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 KIAA0319Q5VV43 1072 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 RSBN1Q5VWQ0 802 aaPredicted RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 NOTUMQ6P988 496 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SNX29P2Q8IUI4 249 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 NT5C3BQ969T7 300 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 TP53INP1Q96A56 240 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 TXNDC15Q96J42 360 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 CAMKK2Q96RR4 588 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 TBL1YQ9BQ87 522 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 MCMBPQ9BTE3 642 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 CCSER2Q9H7U1 834 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SCUBE2Q9NQ36 999 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SUCOQ9UBS9 1254 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 NUDT5Q9UKK9 219 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC27A5Q9Y2P5 690 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 ERI2A8K979 691 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 A8MT66 165 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 hCG_2039718K7EN88 272 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PIRO00625 290 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PPP6CO00743 305 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 AREL1O15033 823 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 NRP2O60462 931 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SRP72O76094 671 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC4A1P02730 911 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 ATP5F1P24539 256 aaPredicted RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 CXCR3P49682 368 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 CCNA1P78396 465 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 VPS26BQ4G0F5 336 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PCID2Q5JVF3 399 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 TBCELQ5QJ74 424 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 C6orf10Q5SRN2 563 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PXDC1Q5TGL8 231 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PLEKHG7Q6ZR37 379 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 DEFB132Q7Z7B7 95 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PDPRQ8NCN5 879 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 ZC3H15Q8WU90 426 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 CITED4Q96RK1 184 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 MRPL57Q9BQC6 102 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 EFHD1Q9BUP0 239 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 KIFC1Q9BW19 673 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 PIF1Q9H611 641 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 ALG9Q9H6U8 611 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 DNMT3BQ9UBC3 853 aaKnown RBP11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 FBXW11Q9UKB1 542 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 FBXO5Q9UKT4 447 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 TRHDEQ9UKU6 1024 aa11.02□□□□□ -0.65
LRRFIP1-211ENST00000478958 SSC5DA1L4H1 1573 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 MYBPHLA2RUH7 354 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SNPHO15079 494 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC22A2O15244 555 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 ACOX3O15254 700 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 MTSS1O43312 755 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 DYRK3O43781 588 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 MFN2O95140 757 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC25A27O95847 323 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 GSTM1P09488 218 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 CPB1P15086 417 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 PKLRP30613 574 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SCNN1AP37088 669 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 YAP1P46937 504 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 MRPS15P82914 257 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 UGP2Q16851 508 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms