RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 EFHD1Q9BUP0 239 aa12.67□□□□□ -0.38
TDP2-204ENST00000478507 RIOK2Q9BVS4 552 aaKnown RBP12.67□□□□□ -0.38
TDP2-204ENST00000478507 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.67□□□□□ -0.38
TDP2-204ENST00000478507 CNOT8Q9UFF9 292 aaKnown RBP12.67□□□□□ -0.38
TDP2-204ENST00000478507 MAN2B2Q9Y2E5 1009 aa12.67□□□□□ -0.38
TDP2-204ENST00000478507 PRKAB1Q9Y478 270 aa12.67□□□□□ -0.38
TDP2-204ENST00000478507 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
TDP2-204ENST00000478507 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 DDX3XO00571 662 aaKnown RBP eCLIP12.66□□□□□ -0.385e-8■■□□□ 11.6
TDP2-204ENST00000478507 ATP1A1P05023 1023 aaKnown RBP12.66□□□□□ -0.38
TDP2-204ENST00000478507 ANKRD34CP0C6C1 535 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 RARAP10276 462 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 F8A1P23610 371 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 IL4RP24394 825 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 MAN1A1P33908 653 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 ARL4AP40617 200 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 PRKCIP41743 596 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 CD97P48960 835 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 BOLA3Q53S33 107 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 SNAP47Q5SQN1 464 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 HENMT1Q5T8I9 393 aaKnown RBP12.66□□□□□ -0.38
TDP2-204ENST00000478507 CLEC17AQ6ZS10 378 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 BBS5Q8N3I7 341 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 NCSTNQ92542 709 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 MIB2Q96AX9 1013 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 LYSMD1Q96S90 227 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 TDRD1Q9BXT4 1180 aaKnown RBP12.66□□□□□ -0.38
TDP2-204ENST00000478507 TRIT1Q9H3H1 467 aaKnown RBP12.66□□□□□ -0.38
TDP2-204ENST00000478507 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 PCDH18Q9HCL0 1135 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 LMBRD1Q9NUN5 540 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 PLAAQ9Y263 795 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 KCNMB2Q9Y691 235 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 UNC79Q9P2D8 2635 aa12.66□□□□□ -0.38
TDP2-204ENST00000478507 RP1L1Q8IWN7 2480 aaPredicted RBP12.66□□□□□ -0.38
TDP2-204ENST00000478507 LILRA5A6NI73 299 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 PRR19A6NJB7 356 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 K7EM74 188 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 INPP4BO15327 924 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 F3P13726 295 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 SERPINB6P35237 376 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 UBE2IP63279 158 aaKnown RBP12.65□□□□□ -0.38
TDP2-204ENST00000478507 MC1RQ01726 317 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 SLC25A11Q02978 314 aaKnown RBP12.65□□□□□ -0.38
TDP2-204ENST00000478507 NFATC2Q13469 925 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 DEFB109BQ30KR1 87 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 LACTB2Q53H82 288 aaPredicted RBP12.65□□□□□ -0.38
TDP2-204ENST00000478507 CHST15Q7LFX5 561 aaPredicted RBP12.65□□□□□ -0.38
TDP2-204ENST00000478507 LRRC49Q8IUZ0 686 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 FAM26EQ8N5C1 309 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 ARRDC2Q8TBH0 407 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 FAM71BQ8TC56 605 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 TEKT4Q8WW24 435 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 MAML1Q92585 1016 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 HSPH1Q92598 858 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 SH3KBP1Q96B97 665 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 ZNF653Q96CK0 615 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 HERPUD2Q9BSE4 406 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 POLR1EQ9GZS1 481 aaKnown RBP12.65□□□□□ -0.38
TDP2-204ENST00000478507 EPB41L1Q9H4G0 881 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 NT5MQ9NPB1 228 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 AIPL1Q9NZN9 384 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 OGFRQ9NZT2 677 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 KCNK6Q9Y257 313 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 ADGRG1Q9Y653 693 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 MRPS18BQ9Y676 258 aaKnown RBP12.65□□□□□ -0.38
TDP2-204ENST00000478507 RPS6KL1Q9Y6S9 549 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 SCINQ9Y6U3 715 aa12.65□□□□□ -0.38
TDP2-204ENST00000478507 KIR2DS5A0A0G2JLQ3 304 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 A0A0G2JNG1 304 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 KIR2DS3K7RE56 304 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 POLR1CO15160 346 aaPredicted RBP12.64□□□□□ -0.39
TDP2-204ENST00000478507 CLDN7O95471 211 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 C9P02748 559 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 MYBL1P10243 752 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 ACP5P13686 325 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 ZNF28P17035 718 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 GARSP41250 739 aaKnown RBP12.64□□□□□ -0.39
TDP2-204ENST00000478507 DSC2Q02487 901 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 GALNT2Q10471 571 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 KIR2DS5Q14953 304 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 LYSMD3Q7Z3D4 306 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 SLC9B2Q86UD5 537 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 NDUFAF2Q8N183 169 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 ESX1Q8N693 406 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 NIPA2Q8N8Q9 360 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 NSMCE1Q8WV22 266 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 FATE1Q969F0 183 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 TBC1D10AQ9BXI6 508 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 ISCUQ9H1K1 167 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 RMI1Q9H9A7 625 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 UCK1Q9HA47 277 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 MRPL47Q9HD33 250 aaKnown RBP12.64□□□□□ -0.39
TDP2-204ENST00000478507 RCOR3Q9P2K3 495 aaPredicted RBP12.64□□□□□ -0.39
TDP2-204ENST00000478507 CPNE7Q9UBL6 633 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 ZNHIT2Q9UHR6 403 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 DNPEPQ9ULA0 475 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms