RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 RP9Q8TA86 221 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 GRIN3AQ8TCU5 1115 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CALML6Q8TD86 181 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 USP33Q8TEY7 942 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RSPH1Q8WYR4 309 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 PPP2R3CQ969Q6 453 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SPDL1Q96EA4 605 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CCDC126Q96EE4 140 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 TSPAN17Q96FV3 270 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ATXN7L3BQ96GX2 97 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CELF6Q96J87 481 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 FAR2Q96K12 515 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CLPTM1LQ96KA5 538 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CNDP1Q96KN2 507 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SERPINB11Q96P15 392 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RANBP9Q96S59 729 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SERPINI1Q99574 410 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 PRRX2Q99811 253 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ECSITQ9BQ95 431 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 APOL2Q9BQE5 337 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 FICDQ9BVA6 458 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 EMILIN2Q9BXX0 1053 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 COG4Q9H9E3 785 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CAB39LQ9H9S4 337 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CHRAC1Q9NRG0 131 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ZDHHC7Q9NXF8 308 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CACNG4Q9UBN1 327 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SCOCQ9UIL1 159 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CDH22Q9UJ99 828 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CYP8B1Q9UNU6 501 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 NEU3Q9UQ49 428 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RUVBL2Q9Y230 463 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CDYLQ9Y232 598 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SSX2IPQ9Y2D8 614 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ACOT9Q9Y305 439 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ANKRD11Q6UB99 2663 aaPredicted RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 A0A0U1RQF3 1178 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 E2F8A0AVK6 867 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 HEATR9A2RTY3 570 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 RGSL1A5PLK6 1076 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MYADML2A6NDP7 307 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TRPC5OSA6NMA1 111 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 KCNU1A8MYU2 1149 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TARM1B6A8C7 271 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 E9PAM4 449 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 E9PBE3 544 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TNPO2O14787 897 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CASQ2O14958 399 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 INPPL1O15357 1258 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PDPK1O15530 556 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PHGDHO43175 533 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 GRID2O43424 1007 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 DCXO43602 365 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 BUD23O43709 281 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ZBTB14O43829 449 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 KLHL41O60662 606 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 B3GAT3O94766 335 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PAPSS2O95340 614 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 BAG2O95816 211 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 AHSGP02765 367 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 HLA-DQB2P05538 268 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 LINGO3P0C6S8 592 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SLC35E2BP0CK96 405 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SLC2A3P11169 496 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SP100P23497 879 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ATP5F1P24539 256 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ARNTP27540 789 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PIK3R1P27986 724 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CDC25CP30307 473 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PPARGP37231 505 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ABCG1P45844 678 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 BRCC3P46736 316 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ARCN1P48444 511 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TUBP50607 506 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CLCN5P51795 746 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 NDST2P52849 883 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SLC5A3P53794 718 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 EPHB1P54762 984 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MTTPP55157 894 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SATB1Q01826 763 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 POU4F1Q01851 419 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TFF2Q03403 129 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PRKCZQ05513 592 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TBL3Q12788 808 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CDC16Q13042 620 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CCNIQ14094 377 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 HNRNPDQ14103 355 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 POU6F1Q14863 301 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 DLG2Q15700 870 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SLC9B1Q4ZJI4 515 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 RALGPS1Q5JS13 557 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ACBD5Q5T8D3 534 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 VWA5B1Q5TIE3 1220 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MFSD14CQ5VZR4 134 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 DENND5AQ6IQ26 1287 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ESRP1Q6NXG1 681 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ZFP1Q6P2D0 407 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CXCL17Q6UXB2 119 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms