RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SLC17A4Q9Y2C5 497 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 EME2A4GXA9 379 aaPredicted RBP17.54■□□□□ 0.4
PTPN7-209ENST00000477554 HACD1B0YJ81 288 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 NOBOXO60393 691 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 NDST3O95803 873 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 AGTP01019 485 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 CA4P22748 312 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 PSMB4P28070 264 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 XRCC4Q13426 336 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 CDCP2Q5VXM1 449 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 TMC3Q7Z5M5 1100 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 TAF8Q7Z7C8 310 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 NDUFAF2Q8N183 169 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 KDF1Q8NAX2 398 aaPredicted RBP17.54■□□□□ 0.4
PTPN7-209ENST00000477554 ATG4AQ8WYN0 398 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 ADGRE3Q9BY15 652 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 FRMD8P1Q9BZ68 369 aaPredicted RBP17.54■□□□□ 0.4
PTPN7-209ENST00000477554 ZFYVE1Q9HBF4 777 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
PTPN7-209ENST00000477554 KNTC1P50748 2209 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 A0A1W2PNU3 283 aaPredicted RBP17.53■□□□□ 0.4
PTPN7-209ENST00000477554 B4DGG1 531 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 TNFRSF10CO14798 259 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 KCNN4O15554 427 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 EML2O95834 649 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 MT-CO3P00414 261 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 JUPP14923 745 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 BPIP17213 487 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 BLKP51451 505 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 SPARCL1Q14515 664 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 ELOCQ15369 112 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 NR0B2Q15466 257 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 KIF26BQ2KJY2 2108 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 KHDC1Q4VXA5 237 aaKnown RBP17.53■□□□□ 0.4
PTPN7-209ENST00000477554 ANKRD20A2Q5SQ80 823 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 ANKRD20A1Q5TYW2 823 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 ANKRD20A3Q5VUR7 823 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 DARS2Q6PI48 645 aaKnown RBP17.53■□□□□ 0.4
PTPN7-209ENST00000477554 ZNF765Q7L2R6 523 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 ZNF572Q7Z3I7 529 aaPredicted RBP17.53■□□□□ 0.4
PTPN7-209ENST00000477554 PRUNE1Q86TP1 453 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 TMPRSS12Q86WS5 348 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 GALNT15Q8N3T1 639 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 FSTL5Q8N475 847 aaPredicted RBP17.53■□□□□ 0.4
PTPN7-209ENST00000477554 TTC30BQ8N4P2 665 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 TAB3Q8N5C8 712 aaPredicted RBP17.53■□□□□ 0.4
PTPN7-209ENST00000477554 GBA3Q9H227 469 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 SMARCAL1Q9NZC9 954 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 PADI4Q9UM07 663 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 DOLKQ9UPQ8 538 aa17.53■□□□□ 0.4
PTPN7-209ENST00000477554 ZFC3H1O60293 1989 aaKnown RBP17.52■□□□□ 0.4
PTPN7-209ENST00000477554 DSPP15924 2871 aaKnown RBP17.52■□□□□ 0.4
PTPN7-209ENST00000477554 CCDC188H7C350 402 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 PDE2AO00408 941 aaPredicted RBP17.52■□□□□ 0.4
PTPN7-209ENST00000477554 USP12O75317 370 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 MTX2O75431 263 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 NFKBIAP25963 317 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 TEAD1P28347 426 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 ADCY8P40145 1251 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 PDX1P52945 283 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 MAZP56270 477 aaKnown RBP17.52■□□□□ 0.4
PTPN7-209ENST00000477554 CTBSQ01459 385 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 CYP4F3Q08477 520 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 ILKQ13418 452 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 SLC1A5Q15758 541 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 SLC14A2Q15849 920 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 SLC30A9Q6PML9 568 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 NRSN1Q8IZ57 195 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 FAM46DQ8NEK8 389 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 MAPK15Q8TD08 544 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 GPBAR1Q8TDU6 330 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 CCDC74AQ96AQ1 378 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 HIC2Q96JB3 615 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 CCDC3Q9BQI4 270 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 FICDQ9BVA6 458 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 FAM83DQ9H4H8 585 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 MAGEE1Q9HCI5 957 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 HAUS2Q9NVX0 235 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 KCTD3Q9Y597 815 aa17.52■□□□□ 0.4
PTPN7-209ENST00000477554 DNAJC6O75061 913 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 FGF1P05230 155 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 SIX1Q15475 284 aaPredicted RBP17.51■□□□□ 0.39
PTPN7-209ENST00000477554 CCNG2Q16589 344 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 GKN2Q86XP6 184 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 ARL10Q8N8L6 244 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 DCBLD1Q8N8Z6 715 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 FAM71DQ8N9W8 422 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 SPATA4Q8NEY3 305 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 GPR156Q8NFN8 814 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 NAT14Q8WUY8 206 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 SCARF2Q96GP6 870 aaPredicted RBP17.51■□□□□ 0.39
PTPN7-209ENST00000477554 AP1M1Q9BXS5 423 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 GPR63Q9BZJ6 419 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 PKD2L2Q9NZM6 624 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 DNPEPQ9ULA0 475 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 CLCA2Q9UQC9 943 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 GPSM3Q9Y4H4 160 aa17.51■□□□□ 0.39
PTPN7-209ENST00000477554 A0A1W2PQM1 296 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 CTAGE15A4D2H0 777 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 METTL18O95568 372 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms