RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CD101Q93033 1021 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 KIF1BPQ96EK5 621 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 BICD1Q96G01 975 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 MAELQ96JY0 434 aaKnown RBP4.15□□□□□ -1.75
UBR3-209ENST00000477461 CD180Q99467 661 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 LRRCC1Q9C099 1032 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 CTDSP1Q9GZU7 261 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 DCTPP1Q9H773 170 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 TTC12Q9H892 705 aaPredicted RBP4.15□□□□□ -1.75
UBR3-209ENST00000477461 HDAC6Q9UBN7 1215 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 PA2G4Q9UQ80 394 aaKnown RBP4.15□□□□□ -1.75
UBR3-209ENST00000477461 EXOC6BQ9Y2D4 811 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 PCDHAC2Q9Y5I4 1007 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 TAF1P21675 1872 aa4.15□□□□□ -1.75
UBR3-209ENST00000477461 KIF13BQ9NQT8 1826 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 A0A0U1RQJ8 604 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 CCDC196A0A1B0GTZ2 297 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.14□□□□□ -1.75
UBR3-209ENST00000477461 hDV102S1A0JD36 115 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 MAGEA13PA6NCF6 341 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 NPIPB11E5RHQ5 1161 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 CREB3O43889 395 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 GUCY1B2O75343 617 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 BBOX1O75936 387 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 CIAO1O76071 339 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 VNN2O95498 520 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 IGHDP01880 384 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 WEE2P0C1S8 567 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 DPEP1P16444 411 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 DCTDP32321 178 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 ILF3Q12906 894 aaKnown RBP eCLIP4.14□□□□□ -1.75
UBR3-209ENST00000477461 LPIN1Q14693 890 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 CRY2Q49AN0 593 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 SH2D4BQ5SQS7 431 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 C9orf139Q6ZV77 190 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.14□□□□□ -1.75
UBR3-209ENST00000477461 EXOC3L1Q86VI1 746 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 MB21D2Q8IYB1 491 aaPredicted RBP4.14□□□□□ -1.75
UBR3-209ENST00000477461 ZMIZ2Q8NF64 920 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 OR4N2Q8NGD1 307 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 CLSTN3Q9BQT9 956 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 PHF7Q9BWX1 381 aaPredicted RBP4.14□□□□□ -1.75
UBR3-209ENST00000477461 ANKRD2Q9GZV1 360 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 WASH6PQ9NQA3 447 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 ATP8A2Q9NTI2 1148 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 RRN3Q9NYV6 651 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 GTF2A1LQ9UNN4 478 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 SLC45A1Q9Y2W3 748 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 MROH5Q6ZUA9 1318 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 DLEC1Q9Y238 1755 aa4.14□□□□□ -1.75
UBR3-209ENST00000477461 A0A0G2JLW4 131 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 A0A1B0GVC2 190 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 PEX12O00623 359 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 SERPINC1P01008 464 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 IFIT1P09914 478 aaKnown RBP4.13□□□□□ -1.75
UBR3-209ENST00000477461 AMD1P17707 334 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 MAPK9P45984 424 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 GPR12P47775 334 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 ADORA2A-AS1P86434 159 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 TFCP2Q12800 502 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 SLC18A3Q16572 532 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 ME3Q16798 604 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 LRRC8DQ7L1W4 858 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 ATG9AQ7Z3C6 839 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 AACSQ86V21 672 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 CHD1LQ86WJ1 897 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 TMTC1Q8IUR5 882 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 MAB21L3Q8N8X9 362 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 LMNTD1Q8N9Z9 388 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 RFWD2Q8NHY2 731 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 TMEM170AQ8WVE7 144 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 RAB40AQ8WXH6 277 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 SORCS1Q8WY21 1168 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 TRIB2Q92519 343 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 MTBPQ96DY7 904 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 WBP1Q96G27 269 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 NEUROD6Q96NK8 337 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 YME1L1Q96TA2 773 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 CSF3RQ99062 836 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 PUS3Q9BZE2 481 aaKnown RBP4.13□□□□□ -1.75
UBR3-209ENST00000477461 IL1RAPL2Q9NP60 686 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 OR6C3Q9NZP0 311 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 SNX9Q9Y5X1 595 aa4.13□□□□□ -1.75
UBR3-209ENST00000477461 SLX4Q8IY92 1834 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 A0A1B0GUL7 405 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 C17orf113A0A1B0GUU1 675 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 GAGE10A6NGK3 116 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 RRN3P2A6NIE6 340 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 UFL1O94874 794 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 CENPAP49450 140 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 BLKP51451 505 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 NLRP5P59047 1200 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 NUCB1Q02818 461 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 TRPC3Q13507 836 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 SETMARQ53H47 684 aaPredicted RBP4.12□□□□□ -1.75
UBR3-209ENST00000477461 CAVIN4Q5BKX8 364 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 CCDC158Q5M9N0 1113 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 MON1AQ86VX9 555 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 GHDCQ8N2G8 530 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms