RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 C9P02748 559 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 CALB1P05937 261 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 NFKBIAP25963 317 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 GFERP55789 205 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 SH3BP2P78314 561 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 TRAF2Q12933 501 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 CA9Q16790 459 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 TPD52L1Q16890 204 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-213ENST00000476777 EIF2S3LQ2VIR3 472 aaKnown RBP11.26□□□□□ -0.61
BRCA1-213ENST00000476777 TMCO4Q5TGY1 634 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 RFX8Q6ZV50 586 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 MON1BQ7L1V2 547 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 SLC9B2Q86UD5 537 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 NLRP8Q86W28 1048 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 PGBD5Q8N414 524 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 SCAMP4Q969E2 229 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 AP2M1Q96CW1 435 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 STAMBPL1Q96FJ0 436 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 COX14Q96I36 57 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 C9orf72Q96LT7 481 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 MCEEQ96PE7 176 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 AGAP2Q99490 1192 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 HERPUD2Q9BSE4 406 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 TBC1D10AQ9BXI6 508 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 ABCG8Q9H221 673 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 VPS16Q9H269 839 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 GANQ9H2C0 597 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 STN1Q9H668 368 aaKnown RBP11.26□□□□□ -0.61
BRCA1-213ENST00000476777 NOD2Q9HC29 1040 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 MLXIPLQ9NP71 852 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 CASS4Q9NQ75 786 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 RCOR3Q9P2K3 495 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-213ENST00000476777 ZNHIT2Q9UHR6 403 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 SVILO95425 2214 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 HIVEP1P15822 2718 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PDZD2O15018 2839 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 GOLGA6L3A6NEY3 463 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 EIF3CLB5ME19 914 aaKnown RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 GADD45BO75293 160 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 NDUFA10O95299 355 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PGLSO95336 258 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PEX11BO96011 259 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 ERCC2P18074 760 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 SOX5P35711 763 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 HSPA9P38646 679 aaKnown RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 GARSP41250 739 aaKnown RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PGDP52209 483 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 JAM2P57087 298 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 OGDHQ02218 1023 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PTSQ03393 145 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 MRPL49Q13405 166 aaKnown RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 DNASE1L3Q13609 305 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 IL11RAQ14626 422 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 INPP5JQ15735 1006 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 CLEC16AQ2KHT3 1053 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 HSP90AA4PQ58FG1 418 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 LRRC66Q68CR7 880 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 DNAJC24Q6P3W2 148 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 MLKLQ8NB16 471 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PIH1D2Q8WWB5 315 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 ZNF599Q96NL3 588 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 OR6C1Q96RD1 312 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 NUDCD1Q96RS6 583 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 KCTD15Q96SI1 283 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 EIF3CQ99613 913 aaKnown RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 OGFRQ9NZT2 677 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 CPNE7Q9UBL6 633 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PADI1Q9ULC6 663 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 AP4E1Q9UPM8 1137 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 KCNK6Q9Y257 313 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PPIL1Q9Y3C6 166 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PRKAB1Q9Y478 270 aa11.25□□□□□ -0.61
BRCA1-213ENST00000476777 PCDHGA9Q9Y5G4 932 aaKnown RBP11.25□□□□□ -0.61
BRCA1-213ENST00000476777 MDC1Q14676 2089 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 KIR2DS5A0A0G2JLQ3 304 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 A0A0G2JNG1 304 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 ANKRD62A6NC57 917 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 LILRA5A6NI73 299 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 KIR2DS3K7RE56 304 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 TOX3O15405 576 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 DAPK3O43293 454 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 ATP1A1P05023 1023 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 PYGLP06737 847 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 F3P13726 295 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 CTPS1P17812 591 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 CASP14P31944 242 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 SEPHS1P49903 392 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 UBE2IP63279 158 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 ZNF235Q14590 738 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 KIR2DS5Q14953 304 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 PRR30Q53SZ7 412 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 PAPD7Q5XG87 772 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 CPZQ66K79 652 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 USP45Q70EL2 814 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms