RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 CAPN8A6NHC0 703 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 UBXN8O00124 270 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 CSPG5O95196 566 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 FESP07332 822 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 PIRTP0C851 137 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 MSX2P35548 267 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 SCNN1BP51168 640 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 CDH13P55290 713 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 TWF1Q12792 350 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 ZNF177Q13360 481 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 PFKFB4Q16877 469 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 SAMD4BQ5PRF9 694 aaKnown RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 KANK2Q63ZY3 851 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 C8orf82Q6P1X6 216 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 PAOXQ6QHF9 649 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 NKAPQ8N5F7 415 aaKnown RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 KLHL23Q8NBE8 558 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 LPGAT1Q92604 370 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 DUS3LQ96G46 650 aaKnown RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 CYP2S1Q96SQ9 504 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 CENPKQ9BS16 269 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 ZBED2Q9BTP6 218 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 TDRD1Q9BXT4 1180 aaKnown RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 ZBP1Q9H171 429 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 COPS7BQ9H9Q2 264 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-208ENST00000476724 HSFX1Q9UBD0 423 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 TMCO1Q9UM00 188 aa16.37■□□□□ 0.21
TMEM53-208ENST00000476724 UBA6A0AVT1 1052 aaPredicted RBP16.36■□□□□ 0.21
TMEM53-208ENST00000476724 PRRG1O14668 218 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 AHCYL1O43865 530 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 SRP72O76094 671 aaKnown RBP16.36■□□□□ 0.21
TMEM53-208ENST00000476724 C8BP07358 591 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 RHOCP08134 193 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 GFAPP14136 432 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 LPOP22079 712 aaPredicted RBP16.36■□□□□ 0.21
TMEM53-208ENST00000476724 PPM1AP35813 382 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 CHN2P52757 468 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 RHDQ02161 417 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 C7orf61Q8IZ16 206 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 OR4K2Q8NGD2 314 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 EXT2Q93063 718 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 GCNAQ96QF7 691 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 ADGRE3Q9BY15 652 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 AKTIPQ9H8T0 292 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 TMEM181Q9P2C4 612 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 CD300AQ9UGN4 299 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 NDUFAF1Q9Y375 327 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 OBSL1O75147 1896 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 GBF1Q92538 1859 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 A0A1B0GVM2 712 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 H3BMM5 538 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 TXNDC9O14530 226 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 COCHO43405 550 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 STAMBPO95630 424 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 CNPP09543 421 aaKnown RBP16.36■□□□□ 0.21
TMEM53-208ENST00000476724 TSPAN8P19075 237 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 GPX3P22352 226 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 RPS24P62847 133 aaKnown RBP16.36■□□□□ 0.21
TMEM53-208ENST00000476724 GEN1Q17RS7 908 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 ANKS6Q68DC2 871 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 PAQR3Q6TCH7 311 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 DENND1CQ8IV53 801 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 SPNS2Q8IVW8 549 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 FBXO39Q8N4B4 442 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 TWIST2Q8WVJ9 160 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 MYRFLQ96LU7 910 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 C3orf30Q96M34 536 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 KLHL32Q96NJ5 620 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 HOPXQ9BPY8 73 aaPredicted RBP16.36■□□□□ 0.21
TMEM53-208ENST00000476724 AGO1Q9UL18 857 aaKnown RBP16.36■□□□□ 0.21
TMEM53-208ENST00000476724 RNF112Q9ULX5 631 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 TBC1D30Q9Y2I9 924 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 SPO11Q9Y5K1 396 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 INSL5Q9Y5Q6 135 aa16.36■□□□□ 0.21
TMEM53-208ENST00000476724 ATP6AP2A0A1C7CYW4 349 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 H0YJX3 145 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 STX16O14662 325 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 CLASP2O75122 1294 aaKnown RBP16.35■□□□□ 0.21
TMEM53-208ENST00000476724 ATP6AP2O75787 350 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 SIX3O95343 332 aaPredicted RBP16.35■□□□□ 0.21
TMEM53-208ENST00000476724 PRLP01236 227 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 CTSAP10619 480 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 TCN1P20061 433 aaPredicted RBP16.35■□□□□ 0.21
TMEM53-208ENST00000476724 FMO4P31512 558 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 TTPAP49638 278 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 CLCQ05315 142 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 LCP2Q13094 533 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 IRAK1BP1Q5VVH5 260 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 PRMT9Q6P2P2 845 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 TXNDC11Q6PKC3 985 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 UGT2A3Q6UWM9 527 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 EFL1Q7Z2Z2 1120 aaKnown RBP16.35■□□□□ 0.21
TMEM53-208ENST00000476724 PHC3Q8NDX5 983 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 MDGA1Q8NFP4 955 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 PKP2Q99959 881 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 C1QTNF3Q9BXJ4 246 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 AP4S1Q9Y587 144 aa16.35■□□□□ 0.21
TMEM53-208ENST00000476724 OAS3Q9Y6K5 1087 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms