RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 RNASEH2BQ5TBB1 312 aaKnown RBP29.34■■■□□ 2.29
HOXB3-208ENST00000476342 IZUMO3Q5VZ72 239 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 HOOK3Q86VS8 718 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 HID1Q8IV36 788 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 MNS1Q8NEH6 495 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 GLYATL1Q969I3 302 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 TSACCQ96A04 125 aaPredicted RBP29.34■■■□□ 2.29
HOXB3-208ENST00000476342 PDXPQ96GD0 296 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 KLF15Q9UIH9 416 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 MOSPD1Q9UJG1 213 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 CNOT6Q9ULM6 557 aaKnown RBP29.34■■■□□ 2.29
HOXB3-208ENST00000476342 TCAF1Q9Y4C2 921 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 DGKBQ9Y6T7 804 aa29.34■■■□□ 2.29
HOXB3-208ENST00000476342 PRSS38A1L453 326 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 SLC30A4O14863 429 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 PIAS2O75928 621 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 SLC25A14O95258 325 aaPredicted RBP29.33■■■□□ 2.29
HOXB3-208ENST00000476342 TMPRSS15P98073 1019 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 BNIP3Q12983 259 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 CHRNA6Q15825 494 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 INAVAQ3KP66 663 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 ATP13A5Q4VNC0 1218 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 PCID2Q5JVF3 399 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 TRIM74Q86UV6 250 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 SAP25Q8TEE9 199 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 PEX13Q92968 403 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 TBATAQ96M53 351 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 RIMKLBQ9ULI2 386 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 PNMA8BQ9ULN7 279 aaPredicted RBP29.33■■■□□ 2.29
HOXB3-208ENST00000476342 SLC17A4Q9Y2C5 497 aa29.33■■■□□ 2.29
HOXB3-208ENST00000476342 EFCAB8A8MWE9 144 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 H7C0S8 307 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 NDC80O14777 642 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 FLRT2O43155 660 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 SDC3O75056 442 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 ASMTLO95671 621 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 TNFP01375 233 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 RSPO4Q2I0M5 234 aaPredicted RBP29.32■■■□□ 2.28
HOXB3-208ENST00000476342 DOK6Q6PKX4 331 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 RD3Q7Z3Z2 195 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 OR1E3Q8WZA6 343 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 SERPINB12Q96P63 405 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 VPS18Q9P253 973 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 SPASTQ9UBP0 616 aa29.32■■■□□ 2.28
HOXB3-208ENST00000476342 GOLGA8MH3BSY2 632 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 SMAPO00193 183 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 GAPDHSO14556 408 aaPredicted RBP29.31■■■□□ 2.28
HOXB3-208ENST00000476342 RAD51CO43502 376 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 SRP72O76094 671 aaKnown RBP29.31■■■□□ 2.28
HOXB3-208ENST00000476342 CEACAM5P06731 702 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 CD59P13987 128 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 DGKAP23743 735 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 IVDP26440 423 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 MGAT1P26572 445 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 TSTD2Q5T7W7 516 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 ARMC3Q5W041 872 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 GATAD2AQ86YP4 633 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 RBFAQ8N0V3 343 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 ZNF398Q8TD17 642 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 PTCD2Q8WV60 388 aaKnown RBP29.31■■■□□ 2.28
HOXB3-208ENST00000476342 SNF8Q96H20 258 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 CYP4F12Q9HCS2 524 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 MRPL40Q9NQ50 206 aaKnown RBP29.31■■■□□ 2.28
HOXB3-208ENST00000476342 SLC30A1Q9Y6M5 507 aa29.31■■■□□ 2.28
HOXB3-208ENST00000476342 CCDC78A2IDD5 438 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 CTSEP14091 401 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 ITGALP20701 1170 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 XIAPP98170 497 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 MORF4L2Q15014 288 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 DBX2Q6ZNG2 339 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 CAND1Q86VP6 1230 aaKnown RBP29.3■■■□□ 2.28
HOXB3-208ENST00000476342 ZNF548Q8NEK5 533 aaPredicted RBP29.3■■■□□ 2.28
HOXB3-208ENST00000476342 GDAP1Q8TB36 358 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 TRIM31Q9BZY9 425 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 ASB8Q9H765 288 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 CARS2Q9HA77 564 aaKnown RBP29.3■■■□□ 2.28
HOXB3-208ENST00000476342 SMOXQ9NWM0 555 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 TMEM98Q9Y2Y6 226 aa29.3■■■□□ 2.28
HOXB3-208ENST00000476342 NEMP2A6NFY4 417 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 IVLP07476 585 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 PSMA3P25788 255 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 MC4RP32245 332 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 GRK6P43250 576 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 NFATC2Q13469 925 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 PEX6Q13608 980 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 PRRT3Q5FWE3 981 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 CDKN2AIPNLQ96HQ2 116 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 RTKNQ9BST9 563 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 TCEAL2Q9H3H9 227 aaPredicted RBP29.29■■■□□ 2.28
HOXB3-208ENST00000476342 TRIM39Q9HCM9 518 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 SYBUQ9NX95 663 aa29.29■■■□□ 2.28
HOXB3-208ENST00000476342 OAS3Q9Y6K5 1087 aaKnown RBP29.29■■■□□ 2.28
HOXB3-208ENST00000476342 CCL22O00626 93 aa29.28■■■□□ 2.28
HOXB3-208ENST00000476342 AQP9O43315 295 aa29.28■■■□□ 2.28
HOXB3-208ENST00000476342 UGT1A9O60656 530 aa29.28■■■□□ 2.28
HOXB3-208ENST00000476342 AVILO75366 819 aa29.28■■■□□ 2.28
HOXB3-208ENST00000476342 UGT1A6P19224 532 aa29.28■■■□□ 2.28
HOXB3-208ENST00000476342 UGT1A1P22309 533 aa29.28■■■□□ 2.28
HOXB3-208ENST00000476342 UGT1A4P22310 534 aa29.28■■■□□ 2.28
HOXB3-208ENST00000476342 UGT1A3P35503 534 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms