RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 GPLD1P80108 840 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 TCEAL1Q15170 157 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 SLC14A2Q15849 920 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 USP53Q70EK8 1073 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 TMPRSS9Q7Z410 1059 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 RFX6Q8HWS3 928 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 PATE1Q8WXA2 126 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 IMP4Q96G21 291 aaKnown RBP20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 OLFM3Q96PB7 478 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 SLC25A51Q9H1U9 297 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 PLEKHM1Q9Y4G2 1056 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 PPM1DO15297 605 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 ITIH1P19827 911 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 NR2C2P49116 596 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 MAPK10P53779 464 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 CFHR1Q03591 330 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 PCSK4Q6UW60 755 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 OR4D9Q8NGE8 314 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 AGAP3Q96P47 875 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 WDR24Q96S15 920 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 SRPK1Q96SB4 655 aaKnown RBP20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 NUDT22Q9BRQ3 303 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 STN1Q9H668 368 aaKnown RBP20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 ZFYVE1Q9HBF4 777 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 WDR70Q9NW82 654 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 KCNK4Q9NYG8 393 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 CNOT6Q9ULM6 557 aaKnown RBP20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 PCDHB11Q9Y5F2 797 aa20.19■□□□□ 0.82
PDLIM4-206ENST00000474421 IGHV1OR21-1A0A087WYE8 117 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 PRAMEF33A0A0G2JMD5 474 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 IGHV5-10-1A0A0J9YXX1 117 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 AKR1B15C9JRZ8 316 aaPredicted RBP20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 SPOPO43791 374 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 PRAMEF10O60809 474 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 DNAJC6O75061 913 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 C1QL1O75973 258 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 SLC2A4P14672 509 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 LIMK2P53671 638 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 TFDP2Q14188 446 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 GALNT3Q14435 633 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 C16orf72Q14CZ0 275 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 CCDC70Q6NSX1 233 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 SFRP1Q8N474 314 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 CCDC112Q8NEF3 446 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 TTC9Q92623 222 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 USP7Q93009 1102 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 RNF25Q96BH1 459 aaPredicted RBP20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 SLC38A3Q99624 504 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 MAGEE1Q9HCI5 957 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 OAS3Q9Y6K5 1087 aaKnown RBP20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 COL6A6A6NMZ7 2263 aa20.18■□□□□ 0.82
PDLIM4-206ENST00000474421 FADS2P1A8MWK0 482 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 GPR89AB7ZAQ6 455 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 ATP1A1P05023 1023 aaKnown RBP20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 GPR89BP0CG08 455 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 ETV5P41161 510 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 DCDC1P59894 354 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 CDK18Q07002 472 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 ZNF569Q5MCW4 686 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 PDPK2PQ6A1A2 396 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 ZNF574Q6ZN55 896 aaPredicted RBP20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 CHST15Q7LFX5 561 aaPredicted RBP20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 LYSMD3Q7Z3D4 306 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 AVL9Q8NBF6 648 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 RNF214Q8ND24 703 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 AGBL5Q8NDL9 886 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 OR10G6Q8NH81 332 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 SLC37A2Q8TED4 501 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 SH3KBP1Q96B97 665 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 AHCYL2Q96HN2 611 aaKnown RBP20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 CCDC74BQ96LY2 380 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 TRIB3Q96RU7 358 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 HERPUD2Q9BSE4 406 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 ZSCAN5AQ9BUG6 496 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 CARD9Q9H257 536 aa20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 NFKBIL1Q9UBC1 381 aaPredicted RBP20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 GCN1Q92616 2671 aaKnown RBP20.17■□□□□ 0.82
PDLIM4-206ENST00000474421 C9orf172C9J069 976 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 AGRPO00253 132 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 PSTPIP1O43586 416 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 TNNT1P13805 278 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 COMTP21964 271 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 DYNLT1P63172 113 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 TEX44Q53QW1 395 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 NPNTQ6UXI9 565 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 ZNF843Q8N446 348 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 TADA1Q96BN2 335 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 TAAR9Q96RI9 348 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 SPATA16Q9BXB7 569 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 CEP41Q9BYV8 373 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 ZMYND15Q9H091 742 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 GLOD4Q9HC38 313 aa20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 SARS2Q9NP81 518 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-206ENST00000474421 A0A0A6YYK5 440 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 OR5K4A6NMS3 321 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 MTSS1O43312 755 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 GRID2O43424 1007 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 DUX1O43812 170 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 NUAK1O60285 661 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms