RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
GAPDH-208ENST00000474249 MLLT10P55197 1068 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 UBE2IP63279 158 aaKnown RBP13.13□□□□□ -0.31
GAPDH-208ENST00000474249 ZNF235Q14590 738 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 SNAP47Q5SQN1 464 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 FKBP15Q5T1M5 1219 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 HIST2H2BCQ6DN03 193 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 USP45Q70EL2 814 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 MARK2Q7KZI7 788 aaKnown RBP13.13□□□□□ -0.31
GAPDH-208ENST00000474249 ESX1Q8N693 406 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 NEK11Q8NG66 645 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 LYSMD1Q96S90 227 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 RIOK2Q9BVS4 552 aaKnown RBP13.13□□□□□ -0.31
GAPDH-208ENST00000474249 PRKAB1Q9Y478 270 aa13.13□□□□□ -0.31
GAPDH-208ENST00000474249 CREBBPQ92793 2442 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 PRPSAP2O60256 369 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
GAPDH-208ENST00000474249 PYGLP06737 847 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 ZNF30P17039 623 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 NFKBIAP25963 317 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 MAN1A1P33908 653 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 PCK1P35558 622 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 MMP13P45452 471 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 CLCNKAP51800 687 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 NFATC2Q13469 925 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 MARC1Q5VT66 337 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 GALNT13Q8IUC8 556 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 PAF1Q8N7H5 531 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 SH3KBP1Q96B97 665 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 CSPG4P5Q96PW8 444 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 TBC1D10AQ9BXI6 508 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 EPB41L1Q9H4G0 881 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 UCK1Q9HA47 277 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 SEPT11Q9NVA2 429 aaKnown RBP13.12□□□□□ -0.31
GAPDH-208ENST00000474249 PCDHGA6Q9Y5G7 932 aa13.12□□□□□ -0.31
GAPDH-208ENST00000474249 KIR2DS5A0A0G2JLQ3 304 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 A0A0G2JNG1 304 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 GOLGA6BA6NDN3 693 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 LILRA5A6NI73 299 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 FADS2P1A8MWK0 482 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 KIR2DS3K7RE56 304 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 TOX3O15405 576 aaPredicted RBP13.11□□□□□ -0.31
GAPDH-208ENST00000474249 RNF8O76064 485 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 CLDN7O95471 211 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 KRT7P08729 469 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 F3P13726 295 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 FERP16591 822 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 CDH6P55285 790 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 GFERP55789 205 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 KIR2DS5Q14953 304 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 HENMT1Q5T8I9 393 aaKnown RBP13.11□□□□□ -0.31
GAPDH-208ENST00000474249 TXNRD3NBQ6F5E7 133 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 CAPRIN2Q6IMN6 1127 aaKnown RBP13.11□□□□□ -0.31
GAPDH-208ENST00000474249 C16orf46Q6P387 395 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 RBM43Q6ZSC3 357 aaKnown RBP13.11□□□□□ -0.31
GAPDH-208ENST00000474249 CHST15Q7LFX5 561 aaPredicted RBP13.11□□□□□ -0.31
GAPDH-208ENST00000474249 LYSMD3Q7Z3D4 306 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 KDELC2Q7Z4H8 507 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 TMEM135Q86UB9 458 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 SLC9B2Q86UD5 537 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 APLFQ8IW19 511 aaPredicted RBP13.11□□□□□ -0.31
GAPDH-208ENST00000474249 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 FAM71BQ8TC56 605 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 MAML1Q92585 1016 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 EID2BQ96D98 161 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 C9orf72Q96LT7 481 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 HERPUD2Q9BSE4 406 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 RMI1Q9H9A7 625 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 MLXIPLQ9NP71 852 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 SCHIP1Q9P0W5 487 aaPredicted RBP13.11□□□□□ -0.31
GAPDH-208ENST00000474249 CPNE7Q9UBL6 633 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 ZNHIT2Q9UHR6 403 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 CROTQ9UKG9 612 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 TLK1Q9UKI8 766 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 SLC30A1Q9Y6M5 507 aa13.11□□□□□ -0.31
GAPDH-208ENST00000474249 SHANK1Q9Y566 2161 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 HIVEP3Q5T1R4 2406 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 DOPEY1Q5JWR5 2465 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 INPP4BO15327 924 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 NUAK1O60285 661 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 FGF5P12034 268 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 GZMAP12544 262 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 DESP17661 470 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 XRCC1P18887 633 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-208ENST00000474249 UQCRFS1P47985 274 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 SH3BP2P78314 561 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 LAMB3Q13751 1172 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 SEPT6Q14141 434 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 BOLA3Q53S33 107 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 PPP1R2P3Q6NXS1 205 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 C6orf15Q6UXA7 325 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-208ENST00000474249 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 PLXDC1Q8IUK5 500 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 CCDC13Q8IYE1 715 aa13.1□□□□□ -0.31
GAPDH-208ENST00000474249 AOPEPQ8N6M6 819 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms