RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HACD3Q9P035 362 aa18.79■□□□□ 0.6
PTCD3-210ENST00000473829 IL17CQ9P0M4 197 aa18.79■□□□□ 0.6
PTCD3-210ENST00000473829 TMPRSS11EQ9UL52 423 aa18.79■□□□□ 0.6
PTCD3-210ENST00000473829 FREM2Q5SZK8 3169 aa18.79■□□□□ 0.6
PTCD3-210ENST00000473829 RP1P56715 2156 aa18.79■□□□□ 0.6
PTCD3-210ENST00000473829 CPED1A4D0V7 1026 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 EME2A4GXA9 379 aaPredicted RBP18.78■□□□□ 0.6
PTCD3-210ENST00000473829 C1QTNF9BB2RNN3 333 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 DNAJC6O75061 913 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 FGGP02679 453 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 C1QTNF9P0C862 333 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 PYCR3Q53H96 274 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 ZNF569Q5MCW4 686 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 PERM1Q5SV97 790 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 CCNI2Q6ZMN8 369 aaPredicted RBP18.78■□□□□ 0.6
PTCD3-210ENST00000473829 EFL1Q7Z2Z2 1120 aaKnown RBP18.78■□□□□ 0.6
PTCD3-210ENST00000473829 ARL10Q8N8L6 244 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 GLIS1Q8NBF1 620 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 PLEKHG4BQ96PX9 1271 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 TBL1YQ9BQ87 522 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 ZSCAN5AQ9BUG6 496 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 CDH19Q9H159 772 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 RAD18Q9NS91 495 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 TRNAU1APQ9NX07 287 aaKnown RBP18.78■□□□□ 0.6
PTCD3-210ENST00000473829 TRMT1Q9NXH9 659 aaKnown RBP18.78■□□□□ 0.6
PTCD3-210ENST00000473829 GULP1Q9UBP9 304 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 PRKAB1Q9Y478 270 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 ARL5AQ9Y689 179 aa18.78■□□□□ 0.6
PTCD3-210ENST00000473829 TPRP12270 2363 aaKnown RBP18.78■□□□□ 0.6
PTCD3-210ENST00000473829 USP27XA6NNY8 438 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 B4DGG1 531 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 GAPDHSO14556 408 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-210ENST00000473829 GPR39O43194 453 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 CEP104O60308 925 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 NOBOXO60393 691 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 ASMTLO95671 621 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 ETS1P14921 441 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 CA5AP35218 305 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 DUSP3P51452 185 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-210ENST00000473829 CTBSQ01459 385 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 P3H1Q32P28 736 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 SLC35F6Q8N357 371 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 GALNT15Q8N3T1 639 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 FAM46DQ8NEK8 389 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 GPR156Q8NFN8 814 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 ANP32BQ92688 251 aaKnown RBP18.77■□□□□ 0.6
PTCD3-210ENST00000473829 GLYATL1Q969I3 302 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 PPP1R2P1Q96PQ5 205 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 OR2M4Q96R27 311 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 IL26Q9NPH9 171 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 SPATS2LQ9NUQ6 558 aaKnown RBP18.77■□□□□ 0.6
PTCD3-210ENST00000473829 NCKIPSDQ9NZQ3 722 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 VPS18Q9P253 973 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 ATXN10Q9UBB4 475 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 PADI4Q9UM07 663 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 ZNF148Q9UQR1 794 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 GPSM3Q9Y4H4 160 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 KCTD3Q9Y597 815 aa18.77■□□□□ 0.6
PTCD3-210ENST00000473829 ZSCAN12O43309 604 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 IFNB1P01574 187 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 GP1BAP07359 652 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 CDK4P11802 303 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 ILF3Q12906 894 aaKnown RBP eCLIP18.76■□□□□ 0.59
PTCD3-210ENST00000473829 KCTD19Q17RG1 926 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-210ENST00000473829 ATP13A5Q4VNC0 1218 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 KHDC1Q4VXA5 237 aaKnown RBP18.76■□□□□ 0.59
PTCD3-210ENST00000473829 OGFOD3Q6PK18 319 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 SLC30A9Q6PML9 568 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 UNQ6494/PRO21346Q6UXR6 183 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 TMPRSS12Q86WS5 348 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 GALNT13Q8IUC8 556 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 PDCD7Q8N8D1 485 aaKnown RBP18.76■□□□□ 0.59
PTCD3-210ENST00000473829 SCG3Q8WXD2 468 aaKnown RBP18.76■□□□□ 0.59
PTCD3-210ENST00000473829 GLMNQ92990 594 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 GSDMCQ9BYG8 508 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 ARNT2Q9HBZ2 717 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 EVA1BQ9NVM1 165 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 TAAR2Q9P1P5 351 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 RABGEF1Q9UJ41 708 aa18.76■□□□□ 0.59
PTCD3-210ENST00000473829 MAP1BP46821 2468 aaKnown RBP18.75■□□□□ 0.59
PTCD3-210ENST00000473829 OPA1O60313 960 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 MTX2O75431 263 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 SLC25A14O95258 325 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-210ENST00000473829 AP2A1O95782 977 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 ZSCAN5DPP0CG00 497 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 ZNF8P17098 575 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-210ENST00000473829 STIP1P31948 543 aaKnown RBP18.75■□□□□ 0.59
PTCD3-210ENST00000473829 SPAM1P38567 509 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 RPIAP49247 311 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 CAMK2BQ13554 666 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 TAF1AQ15573 450 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-210ENST00000473829 CHRNA6Q15825 494 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 CCNG2Q16589 344 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 LONRF2Q1L5Z9 754 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 PDPK2PQ6A1A2 396 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 FAM151BQ6UXP7 276 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 MICALCLQ6ZW33 695 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 ADGRG6Q86SQ4 1221 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 OR2AG1Q9H205 316 aa18.75■□□□□ 0.59
PTCD3-210ENST00000473829 DPEP2Q9H4A9 486 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms