RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 RHOQP17081 205 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 TYRP1P17643 537 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 GPR1P46091 355 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 GSDMDP57764 484 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 GCNT1Q02742 428 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ACY1Q03154 408 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 CDC16Q13042 620 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ATP1A4Q13733 1029 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 KIR2DS5Q14953 304 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ANO6Q4KMQ2 910 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 PYCR3Q53H96 274 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 TMCO4Q5TGY1 634 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 OLFML1Q6UWY5 402 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 PRSS42Q7Z5A4 293 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 CAMK1DQ8IU85 385 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ZDHHC17Q8IUH5 632 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 TMEM126BQ8IUX1 230 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 TRIM48Q8IWZ4 208 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 PELI3Q8N2H9 469 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 CBARPQ8N350 705 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ENDOVQ8N8Q3 282 aaKnown RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 NETO2Q8NC67 525 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 KAT5Q92993 513 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ZDHHC12Q96GR4 267 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 PAGE5Q96GU1 130 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 CCDC120Q96HB5 630 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ZNF396Q96N95 335 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 AGAP3Q96P47 875 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 IP6K3Q96PC2 410 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 TBCBQ99426 244 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 WDR77Q9BQA1 342 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 GTPBP4Q9BZE4 634 aaKnown RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 UPF2Q9HAU5 1272 aaKnown RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 FGF21Q9NSA1 209 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 OLAHQ9NV23 265 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 TMEM248Q9NWD8 314 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 CPNE7Q9UBL6 633 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 ARMCX3Q9UH62 379 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-209ENST00000472116 TCFL5Q9UL49 500 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 NUP210LQ5VU65 1888 aa10.12□□□□□ -0.79
CDHR3-209ENST00000472116 PCM1Q15154 2024 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 CCL21O00585 134 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 PEX12O00623 359 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 SLC16A3O15427 465 aaKnown RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 SNX2O60749 519 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 JRKO75564 520 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 SCRG1O75711 98 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 ASMTLO95671 621 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 C8BP07358 591 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 RAB40ALP0C0E4 278 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 F3P13726 295 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 KLK2P20151 261 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 TEAD1P28347 426 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 BCL2L1Q07817 233 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 LAMB3Q13751 1172 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 SLC25A52Q3SY17 297 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 OTUD1Q5VV17 481 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 IYDQ6PHW0 289 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 ZNF765Q7L2R6 523 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 ZSWIM9Q86XI8 627 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 TGIF2LYQ8IUE0 185 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 GALNT16Q8N428 558 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 ZNF397Q8NF99 534 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 TSG101Q99816 390 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 NLNQ9BYT8 704 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 CHST8Q9H2A9 424 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 AKIRIN1Q9H9L7 192 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 NDFIP2Q9NV92 336 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 LHX3Q9UBR4 397 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 UBA2Q9UBT2 640 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 AJAP1Q9UKB5 411 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 NOVA2Q9UNW9 492 aaKnown RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 PADI2Q9Y2J8 665 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 PCDHGB6Q9Y5F9 930 aa10.11□□□□□ -0.79
CDHR3-209ENST00000472116 NCOA6Q14686 2063 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-209ENST00000472116 YEATS4O95619 227 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 EML2O95834 649 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 VIPP01282 170 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 NELFEP18615 380 aaKnown RBP10.1□□□□□ -0.79
CDHR3-209ENST00000472116 TFE3P19532 575 aaPredicted RBP10.1□□□□□ -0.79
CDHR3-209ENST00000472116 TSFMP43897 325 aaKnown RBP10.1□□□□□ -0.79
CDHR3-209ENST00000472116 ME1P48163 572 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 ARCN1P48444 511 aaKnown RBP10.1□□□□□ -0.79
CDHR3-209ENST00000472116 FMO5P49326 533 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 SMSP52788 366 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 CASP6P55212 293 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 MARSP56192 900 aaKnown RBP10.1□□□□□ -0.79
CDHR3-209ENST00000472116 IRGCQ6NXR0 463 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 FAM92BQ6ZTR7 304 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 CHST15Q7LFX5 561 aaPredicted RBP10.1□□□□□ -0.79
CDHR3-209ENST00000472116 PHLDB2Q86SQ0 1253 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 FAM131BQ86XD5 332 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 ZBTB2Q8N680 514 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 BCORP1Q8N888 145 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 C1orf131Q8NDD1 294 aaKnown RBP10.1□□□□□ -0.79
CDHR3-209ENST00000472116 KLHL6Q8WZ60 621 aa10.1□□□□□ -0.79
CDHR3-209ENST00000472116 UBXN4Q92575 508 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms