RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 A0A0G2JNG1 304 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 LILRA5A6NI73 299 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 SIGLEC16A6NMB1 481 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 KIR2DS3K7RE56 304 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 TOX3O15405 576 aaPredicted RBP18.81■□□□□ 0.6
SORT1-203ENST00000471996 LRCH4O75427 683 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 SPAG6O75602 509 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 MT-ND3P03897 115 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 FGF5P12034 268 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 SLC2A4P14672 509 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 TNFAIP3P21580 790 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 CCL11P51671 97 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 LBRQ14739 615 aaKnown RBP18.81■□□□□ 0.6
SORT1-203ENST00000471996 KIR2DS5Q14953 304 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 PTPRRQ15256 657 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 UGT8Q16880 541 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 VWA3BQ502W6 1294 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 MIIPQ5JXC2 388 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 JMJD6Q6NYC1 403 aaPredicted RBP18.81■□□□□ 0.6
SORT1-203ENST00000471996 CHST15Q7LFX5 561 aaPredicted RBP18.81■□□□□ 0.6
SORT1-203ENST00000471996 NLRP8Q86W28 1048 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 Q8NA96 180 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 C3orf20Q8ND61 904 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 SCAMP4Q969E2 229 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 ELMO2Q96JJ3 720 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 ZNF768Q9H5H4 540 aaKnown RBP18.81■□□□□ 0.6
SORT1-203ENST00000471996 SLAMF7Q9NQ25 335 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 ACSS2Q9NR19 701 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 OGFRQ9NZT2 677 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 ADAM22Q9P0K1 906 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 CPNE7Q9UBL6 633 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 PRKAB1Q9Y478 270 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 ZNF451Q9Y4E5 1061 aa18.81■□□□□ 0.6
SORT1-203ENST00000471996 ZNF106Q9H2Y7 1883 aaKnown RBP18.8■□□□□ 0.6
SORT1-203ENST00000471996 HIVEP3Q5T1R4 2406 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 OR5K4A6NMS3 321 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 DFFAO00273 331 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 DNAJC6O75061 913 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 ASMTLO95671 621 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 PYGLP06737 847 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 UNGP13051 313 aaPredicted RBP18.8■□□□□ 0.6
SORT1-203ENST00000471996 F3P13726 295 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 SEPHS1P49903 392 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 SLC10A7Q0GE19 358 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 CHAF1BQ13112 559 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
SORT1-203ENST00000471996 AVL9Q8NBF6 648 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 AGAP2Q99490 1192 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 BRD8Q9H0E9 1235 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 ING2Q9H160 280 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 LUZP4Q9P127 313 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 KCNK6Q9Y257 313 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 SLC5A6Q9Y289 635 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 PCDHGB7Q9Y5F8 929 aa18.8■□□□□ 0.6
SORT1-203ENST00000471996 EEF2KO00418 725 aaKnown RBP18.79■□□□□ 0.6
SORT1-203ENST00000471996 TRAF2Q12933 501 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 CHRNA6Q15825 494 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 TMCO4Q5TGY1 634 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 TRIM72Q6ZMU5 477 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 USP45Q70EL2 814 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 ZNF765Q7L2R6 523 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 EXD1Q8NHP7 514 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 ZNF599Q96NL3 588 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 TGM7Q96PF1 710 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 NUDCD1Q96RS6 583 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 GPR87Q9BY21 358 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 UCK1Q9HA47 277 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 NOD2Q9HC29 1040 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 GPATCH2LQ9NWQ4 482 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 VPS18Q9P253 973 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 MAP10Q9P2G4 905 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 PPIL1Q9Y3C6 166 aa18.79■□□□□ 0.6
SORT1-203ENST00000471996 TNRC6AQ8NDV7 1962 aaKnown RBP18.79■□□□□ 0.6
SORT1-203ENST00000471996 A0A0U1RQS6 177 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 ARGFXA6NJG6 315 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 SNX2O60749 519 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 DPM1O60762 260 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 GFPT2O94808 682 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 PGLSO95336 258 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 PRKCSHP14314 528 aaPredicted RBP18.78■□□□□ 0.6
SORT1-203ENST00000471996 PTPN4P29074 926 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 HSPA9P38646 679 aaKnown RBP18.78■□□□□ 0.6
SORT1-203ENST00000471996 NSFP46459 744 aaKnown RBP18.78■□□□□ 0.6
SORT1-203ENST00000471996 UBE2IP63279 158 aaKnown RBP18.78■□□□□ 0.6
SORT1-203ENST00000471996 LRRC66Q68CR7 880 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 PPP1R3BQ86XI6 285 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 SLC34A3Q8N130 599 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 NPWQ8N729 165 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 C5orf34Q96MH7 638 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 RUFY1Q96T51 708 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 PCDHB18PQ96TA0 734 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 CNPY3Q9BT09 278 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 VPS16Q9H269 839 aa18.78■□□□□ 0.6
SORT1-203ENST00000471996 TCRBV5S1A1TA0A578 114 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 ANKRD62A6NC57 917 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 CEACAM4O75871 244 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 UBXN7O94888 489 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 CBX6O95503 412 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 ATP1A1P05023 1023 aaKnown RBP18.77■□□□□ 0.6
SORT1-203ENST00000471996 CALB1P05937 261 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms