RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 LPCAT4Q643R3 524 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 CLEC6AQ6EIG7 209 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 RETSATQ6NUM9 610 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 ANKRD33Q7Z3H0 272 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 TCEAL8Q8IYN2 117 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 HMGCLL1Q8TB92 370 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 ZNF483Q8TF39 744 aaPredicted RBP10.57□□□□□ -0.72
APLF-204ENST00000471727 ZUFSPQ96AP4 578 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 PBXIP1Q96AQ6 731 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 TMEM169Q96HH4 297 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 ZNF558Q96NG5 402 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 BIRC8Q96P09 236 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 GPR21Q99679 349 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 HIPK3Q9H422 1215 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 EBF3Q9H4W6 596 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 TNFRSF12AQ9NP84 129 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 GKN1Q9NS71 199 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 NDUFA13Q9P0J0 144 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 CD300AQ9UGN4 299 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 SUFUQ9UMX1 484 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 ASB3Q9Y575 518 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 TNPO3Q9Y5L0 923 aaKnown RBP10.57□□□□□ -0.72
APLF-204ENST00000471727 SLC30A1Q9Y6M5 507 aa10.57□□□□□ -0.72
APLF-204ENST00000471727 DYTNA2CJ06 578 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 E7ENX8 843 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 H3BMM5 538 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 FBP2O00757 339 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 PIP5K1BO14986 540 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 TSPAN3O60637 253 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 SNX2O60749 519 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 ECI2O75521 394 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 ESRRBO95718 433 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 MBL2P11226 248 aaPredicted RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 RPS3P23396 243 aaKnown RBP eCLIP10.56□□□□□ -0.72
APLF-204ENST00000471727 RFC2P35250 354 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 DPP6P42658 865 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 ERFP50548 548 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 PTPN5P54829 565 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 CDH13P55290 713 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 RHOAP61586 193 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 MRPS22P82650 360 aaKnown RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 CRY1Q16526 586 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 PPP1R3AQ16821 1122 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 TCTN1Q2MV58 587 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 KIF19Q2TAC6 998 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 SETMARQ53H47 684 aaPredicted RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 ZRANB3Q5FWF4 1079 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 ARMC12Q5T9G4 340 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 CNKSR3Q6P9H4 555 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 CYHR1Q6ZMK1 362 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 DNAJB7Q7Z6W7 309 aaPredicted RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 SPATA24Q86W54 205 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 GPSM1Q86YR5 675 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 TICAM1Q8IUC6 712 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 FAM217AQ8IXS0 508 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 MARVELD2Q8N4S9 558 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 MINDY1Q8N5J2 469 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 DCAF4L2Q8NA75 395 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 TRPC4APQ8TEL6 797 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 EXT2Q93063 718 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 FUBP1Q96AE4 644 aaKnown RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 ACDQ96AP0 544 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 TOX2Q96NM4 488 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 GBP5Q96PP8 586 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 FEM1AQ9BSK4 669 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 MUC13Q9H3R2 512 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 SDR39U1Q9NRG7 319 aaPredicted RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.56□□□□□ -0.72
APLF-204ENST00000471727 RIC8BQ9NVN3 520 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 NUDT4Q9NZJ9 180 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 IL17CQ9P0M4 197 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 DNMT3BQ9UBC3 853 aaKnown RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 HCSTQ9UBK5 93 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 LHX3Q9UBR4 397 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 FKBPLQ9UIM3 349 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 RIMS3Q9UJD0 308 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 LSM7Q9UK45 103 aaKnown RBP10.56□□□□□ -0.72
APLF-204ENST00000471727 FAM50BQ9Y247 325 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 MED16Q9Y2X0 877 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 PCDHGC4Q9Y5F7 938 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 CHD5Q8TDI0 1954 aa10.56□□□□□ -0.72
APLF-204ENST00000471727 A0A0J9YYE9 177 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 E5RI56 91 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 GFRA2O00451 464 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 PRMT5O14744 637 aaPredicted RBP10.55□□□□□ -0.72
APLF-204ENST00000471727 TBL1XO60907 577 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 CD160O95971 181 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 NPPAP01160 153 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 IRF1P10914 325 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 ZNF7P17097 686 aaPredicted RBP10.55□□□□□ -0.72
APLF-204ENST00000471727 RPL17P18621 184 aaKnown RBP10.55□□□□□ -0.72
APLF-204ENST00000471727 SLC7A1P30825 629 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 HMGCLP35914 325 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 AQP4P55087 323 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 SMAD3P84022 425 aaKnown RBP10.55□□□□□ -0.72
APLF-204ENST00000471727 FOLH1Q04609 750 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 TRAF2Q12933 501 aa10.55□□□□□ -0.72
APLF-204ENST00000471727 BNIP2Q12982 314 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms