RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MKLN1Q9UL63 735 aa1.38□□□□□ -2.19
UBXN4-207ENST00000471246 KLHL20Q9Y2M5 609 aa1.38□□□□□ -2.19
UBXN4-207ENST00000471246 CEPT1Q9Y6K0 416 aa1.38□□□□□ -2.19
UBXN4-207ENST00000471246 CAPN7Q9Y6W3 813 aa1.38□□□□□ -2.19
UBXN4-207ENST00000471246 UTYO14607 1347 aa1.38□□□□□ -2.19
UBXN4-207ENST00000471246 IGLV5-45A0A087WSX0 123 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CCDC196A0A1B0GTZ2 297 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ZCWPW2A0A1B0GU75 182 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CTAGE9A4FU28 777 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TMEM178BH3BS89 294 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 HS3ST1O14792 307 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 EIF3DO15371 548 aaKnown RBP eCLIP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 INHBAP08476 426 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 PATE4P0C8F1 98 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF883P0CG24 379 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CTAGE8P0CG41 777 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 PAX1P15863 534 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 NR1D1P20393 614 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ALDH4A1P30038 563 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 HOXC9P31274 260 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 AHRP35869 848 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 DCTP40126 519 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 UBA7P41226 1012 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 MAPK9P45984 424 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 PIP4K2AP48426 406 aaPredicted RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 AMPHP49418 695 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 HARS2P49590 506 aaKnown RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 VEGFCP49767 419 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 MMP14P50281 582 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TERF1P54274 439 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 F2RL1P55085 397 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 EIF3BP55884 814 aaKnown RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CLDN20P56880 219 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 EEF1A1P68104 462 aaKnown RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 RPL24P83731 157 aaKnown RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 PLIN5Q00G26 463 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 PTP4A2Q12974 167 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 GAGE5Q13069 117 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 GAGE6Q13070 117 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 MAD2L1Q13257 205 aaPredicted RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 BAK1Q16611 211 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 DECR1Q16698 335 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 GSTA3Q16772 222 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TMEM30BQ3MIR4 351 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF876PQ49A33 203 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TMEM35AQ53FP2 167 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 DCST1Q5T197 706 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CCNYL2Q5T2Q4 361 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 EEF1A1P5Q5VTE0 462 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ARHGAP17Q68EM7 881 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 SIGIRRQ6IA17 410 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CEACAM20Q6UY09 585 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 DGLUCYQ7Z3D6 616 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 HEATR4Q86WZ0 1026 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CTAGE4Q8IX94 777 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 CTCFLQ8NI51 663 aaPredicted RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 THAP6Q8TBB0 222 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TAS1R2Q8TE23 839 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TM9SF4Q92544 642 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TAF15Q92804 592 aaKnown RBP eCLIP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 APBB2Q92870 758 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 GTF3C6Q969F1 213 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 IGSF8Q969P0 613 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 HVCN1Q96D96 273 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 SAAL1Q96ER3 474 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ST6GAL2Q96JF0 529 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 C17orf77Q96MU5 243 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 F2RL3Q96RI0 385 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 NR1H4Q96RI1 486 aaPredicted RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ACOX2Q99424 681 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 LITAFQ99732 161 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 FSD1Q9BTV5 496 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 AGXT2Q9BYV1 514 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 BARHL1Q9BZE3 327 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 GFRA4Q9GZZ7 299 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 TFB2MQ9H5Q4 396 aaKnown RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 UPF2Q9HAU5 1272 aaKnown RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ASAH2Q9NR71 780 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 FAM118AQ9NWS6 357 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 MARCH4Q9P2E8 410 aaPredicted RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF624Q9P2J8 865 aaPredicted RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 POLG2Q9UHN1 485 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 FBXL2Q9UKC9 423 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 GJD2Q9UKL4 321 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 INTS6Q9UL03 887 aaKnown RBP1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ACSL5Q9ULC5 683 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 ARHGAP26Q9UNA1 814 aa1.37□□□□□ -2.19
UBXN4-207ENST00000471246 A0A1B0GU03 582 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 A0A1W2PP11 408 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 OR5K3A6NET4 321 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ANTXRLA6NF34 631 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 FAM90A26D6RGX4 464 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 BLOC1S5-TXNDC5H3BN57 136 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 M0QZ24 198 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ANKRD28O15084 1053 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 SYNGR3O43761 229 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PRKNO60260 465 aaPredicted RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 CTSVO60911 334 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 NKX2-2O95096 273 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 TBX6O95947 436 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms